Experiment: a-Ketoglutaric
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2770 and HP15_2771 are separated by 0 nucleotides HP15_2771 and HP15_2772 are separated by 41 nucleotides
HP15_2770: HP15_2770 - permease for cytosine/purines uracil thiamine allantoin, at 2,923,117 to 2,924,400
_2770
HP15_2771: HP15_2771 - DNA-binding protein, at 2,924,401 to 2,925,024
_2771
HP15_2772: HP15_2772 - N-isopropylammelide isopropylaminohydrolase, at 2,925,066 to 2,926,310
_2772
Position (kb)
2924
2925
2926 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2923.467 kb on - strand, within HP15_2770 at 2923.559 kb on + strand, within HP15_2770 at 2923.590 kb on + strand, within HP15_2770 at 2923.599 kb on + strand, within HP15_2770 at 2923.641 kb on + strand, within HP15_2770 at 2923.691 kb on + strand, within HP15_2770 at 2923.691 kb on + strand, within HP15_2770 at 2923.696 kb on + strand, within HP15_2770 at 2923.699 kb on - strand, within HP15_2770 at 2923.737 kb on + strand, within HP15_2770 at 2923.849 kb on + strand, within HP15_2770 at 2923.858 kb on + strand, within HP15_2770 at 2923.858 kb on + strand, within HP15_2770 at 2923.863 kb on + strand, within HP15_2770 at 2923.871 kb on + strand, within HP15_2770 at 2923.895 kb on + strand, within HP15_2770 at 2923.919 kb on - strand, within HP15_2770 at 2923.929 kb on - strand, within HP15_2770 at 2923.975 kb on + strand, within HP15_2770 at 2923.975 kb on + strand, within HP15_2770 at 2923.983 kb on - strand, within HP15_2770 at 2923.988 kb on - strand, within HP15_2770 at 2923.990 kb on + strand, within HP15_2770 at 2923.990 kb on + strand, within HP15_2770 at 2924.025 kb on - strand, within HP15_2770 at 2924.085 kb on - strand, within HP15_2770 at 2924.206 kb on - strand, within HP15_2770 at 2924.213 kb on + strand, within HP15_2770 at 2924.283 kb on - strand at 2924.323 kb on + strand at 2924.331 kb on - strand at 2924.423 kb on + strand at 2924.423 kb on + strand at 2924.430 kb on - strand at 2924.430 kb on - strand at 2924.495 kb on + strand, within HP15_2771 at 2924.532 kb on + strand, within HP15_2771 at 2924.611 kb on - strand, within HP15_2771 at 2924.676 kb on + strand, within HP15_2771 at 2924.684 kb on + strand, within HP15_2771 at 2924.697 kb on + strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.786 kb on + strand, within HP15_2771 at 2924.824 kb on - strand, within HP15_2771 at 2924.875 kb on + strand, within HP15_2771 at 2924.992 kb on + strand at 2925.398 kb on + strand, within HP15_2772 at 2925.423 kb on + strand, within HP15_2772 at 2925.431 kb on - strand, within HP15_2772 at 2925.460 kb on + strand, within HP15_2772 at 2925.580 kb on + strand, within HP15_2772 at 2925.616 kb on - strand, within HP15_2772 at 2925.623 kb on + strand, within HP15_2772 at 2925.631 kb on - strand, within HP15_2772 at 2925.691 kb on - strand, within HP15_2772 at 2925.787 kb on + strand, within HP15_2772
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric remove 2,923,467 - HP15_2770 0.27 +1.1 2,923,559 + HP15_2770 0.34 -0.8 2,923,590 + HP15_2770 0.37 +1.9 2,923,599 + HP15_2770 0.38 +1.8 2,923,641 + HP15_2770 0.41 +1.8 2,923,691 + HP15_2770 0.45 -0.5 2,923,691 + HP15_2770 0.45 -1.1 2,923,696 + HP15_2770 0.45 -0.2 2,923,699 - HP15_2770 0.45 -1.9 2,923,737 + HP15_2770 0.48 +1.9 2,923,849 + HP15_2770 0.57 -1.5 2,923,858 + HP15_2770 0.58 -0.8 2,923,858 + HP15_2770 0.58 -1.2 2,923,863 + HP15_2770 0.58 +1.6 2,923,871 + HP15_2770 0.59 -0.6 2,923,895 + HP15_2770 0.61 -0.1 2,923,919 - HP15_2770 0.62 +1.5 2,923,929 - HP15_2770 0.63 +1.9 2,923,975 + HP15_2770 0.67 +1.2 2,923,975 + HP15_2770 0.67 +2.5 2,923,983 - HP15_2770 0.67 -0.5 2,923,988 - HP15_2770 0.68 +1.8 2,923,990 + HP15_2770 0.68 -0.3 2,923,990 + HP15_2770 0.68 -0.5 2,924,025 - HP15_2770 0.71 -0.5 2,924,085 - HP15_2770 0.75 +0.0 2,924,206 - HP15_2770 0.85 -0.1 2,924,213 + HP15_2770 0.85 +1.0 2,924,283 - +1.6 2,924,323 + -0.6 2,924,331 - -0.1 2,924,423 + -0.2 2,924,423 + -1.3 2,924,430 - +1.8 2,924,430 - +1.8 2,924,495 + HP15_2771 0.15 -0.2 2,924,532 + HP15_2771 0.21 +0.2 2,924,611 - HP15_2771 0.34 -0.6 2,924,676 + HP15_2771 0.44 +1.6 2,924,684 + HP15_2771 0.45 -1.2 2,924,697 + HP15_2771 0.47 +1.9 2,924,738 - HP15_2771 0.54 +0.1 2,924,738 - HP15_2771 0.54 -2.3 2,924,738 - HP15_2771 0.54 -0.2 2,924,786 + HP15_2771 0.62 +1.7 2,924,824 - HP15_2771 0.68 -0.5 2,924,875 + HP15_2771 0.76 +1.8 2,924,992 + +1.5 2,925,398 + HP15_2772 0.27 +1.9 2,925,423 + HP15_2772 0.29 -0.4 2,925,431 - HP15_2772 0.29 -0.4 2,925,460 + HP15_2772 0.32 -0.4 2,925,580 + HP15_2772 0.41 -0.8 2,925,616 - HP15_2772 0.44 +1.5 2,925,623 + HP15_2772 0.45 +1.2 2,925,631 - HP15_2772 0.45 -1.8 2,925,691 - HP15_2772 0.50 -0.6 2,925,787 + HP15_2772 0.58 +0.3
Or see this region's nucleotide sequence