Strain Fitness in Shewanella amazonensis SB2B around Sama_2938

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,490,193	-		Sama_2937	0.27	-1.0
3,490,256	+		Sama_2937	0.35	+0.0
3,490,257	-		Sama_2937	0.36	-0.3
3,490,286	+		Sama_2937	0.39	-0.7
3,490,396	+		Sama_2937	0.54	+1.4
3,490,397	-		Sama_2937	0.54	+0.4
3,490,413	+		Sama_2937	0.56	+0.1
3,490,414	-		Sama_2937	0.56	-0.9
3,490,414	-		Sama_2937	0.56	+0.4
3,490,490	+		Sama_2937	0.66	-0.2
3,490,547	+		Sama_2937	0.73	-0.6
3,490,548	-		Sama_2937	0.74	-1.2
3,490,548	-		Sama_2937	0.74	-1.3
3,490,548	-		Sama_2937	0.74	+0.1
3,490,548	-		Sama_2937	0.74	+0.5
3,490,625	+		Sama_2937	0.84	+0.4
3,490,625	+		Sama_2937	0.84	+1.4
3,490,626	-		Sama_2937	0.84	+0.2
3,490,651	-		Sama_2937	0.87	-0.7
3,490,651	-		Sama_2937	0.87	-0.7
3,490,651	-		Sama_2937	0.87	-0.2
3,490,713	+				-0.1
3,490,714	-				-1.5
3,490,720	-				+1.4
3,490,720	-				+0.1
3,490,720	-				-0.2
3,490,748	-				+1.4
3,490,788	+				-0.4
3,490,788	+				+0.4
3,490,789	-				-0.6
3,490,789	-				+0.8
3,490,789	-				+0.8
3,490,798	+				-2.8
3,490,799	-				-0.5
3,490,799	-				-0.7
3,490,810	+				+1.0
3,490,810	+				-1.1
3,490,844	+				+0.9
3,490,844	+				+0.8
3,490,845	-				-0.2
3,490,845	-				-1.2
3,490,852	-				-0.7
3,490,852	-				+0.8
3,490,890	+				+1.8
3,490,890	+				-0.3
3,490,890	+				-1.0
3,490,891	-				-0.0
3,490,891	-				+0.1
3,490,891	-				+0.1
3,490,893	+				-0.6
3,490,894	-				-0.4
3,490,894	-				+1.4
3,490,911	+				-1.7
3,490,911	+				-2.1
3,490,911	+				+1.3
3,490,911	+				-1.0
3,490,911	+				-0.2
3,490,911	+				+3.0
3,490,911	+				-1.5
3,490,911	+				-1.9
3,490,911	+				-0.4
3,490,911	+				-0.5
3,490,911	+				+0.8
3,490,911	+				-0.1
3,490,912	-				+1.1
3,490,912	-				-1.5
3,490,912	-				-0.7
3,490,912	-				-0.2
3,490,912	-				-1.8
3,490,912	-				-1.3
3,490,912	-				-1.3
3,490,912	-				-1.0
3,490,912	-				-0.2
3,490,912	-				-0.4
3,490,915	+				+1.4
3,490,915	+				+0.8
3,490,916	-				-0.6
3,490,916	-				+1.1
3,490,916	-				+0.5
3,490,926	-				-0.3
3,490,935	+				+0.4
3,490,936	-				-1.4
3,490,997	+				-1.7
3,490,998	-				-0.4
3,491,006	+				+1.4
3,491,006	+				+0.1
3,491,006	+				+0.4
3,491,007	-				-0.5
3,491,007	-				-0.2
3,491,008	+				+0.3
3,491,009	-				+0.8
3,491,015	-				+3.4
3,491,024	+				-0.2
3,491,024	+				-2.0
3,491,030	+				-0.7
3,491,030	+				-1.3
3,491,030	+				+1.1
3,491,030	+				-0.2
3,491,031	-				+0.3
3,491,031	-				+0.8
3,491,031	-				+1.4
3,491,049	+				+0.6
3,491,049	+				+0.2
3,491,056	+				-0.2
3,491,056	+				+1.0
3,491,056	+				-1.3
3,491,057	-				+0.8
3,491,057	-				-0.0
3,491,111	+				+0.4
3,491,114	+				-0.3
3,491,114	+				-0.7
3,491,115	-				-0.9
3,491,115	-				+1.1
3,491,172	+				-0.2
3,491,172	+				+0.4
3,491,173	-				-0.5
3,491,173	-				+0.3
3,491,173	-				+0.6
3,491,220	+				+0.8
3,491,221	-				-0.2
3,491,239	+				-0.6
3,491,239	+				-1.2
3,491,239	+				+1.4
3,491,239	+				+0.3
3,491,239	+				+0.4
3,491,239	+				+1.0
3,491,239	+				-1.0
3,491,239	+				-1.4
3,491,239	+				+0.4
3,491,239	+				-0.4
3,491,239	+				-0.6
3,491,239	+				+2.4
3,491,240	-				-0.6
3,491,240	-				-0.8
3,491,240	-				-1.7
3,491,240	-				-1.0
3,491,240	-				-0.4
3,491,240	-				-0.8
3,491,240	-				+0.1
3,491,240	-				-0.9
3,491,240	-				+0.6
3,491,240	-				-0.9
3,491,240	-				-1.0
3,491,240	-				+1.3
3,491,240	-				+0.4
3,491,241	+				-0.3
3,491,242	-				-0.5
3,491,242	-				+0.1
3,491,242	-				-0.3
3,491,242	-				-0.6
3,491,283	+				-0.7
3,491,310	+				-0.7
3,491,311	-				+0.5
3,491,311	-				+1.4
3,491,312	+				-0.4
3,491,312	+				-0.1
3,491,313	-				-1.1
3,491,313	-				+0.3
3,491,313	-				-1.6
3,491,391	-				-1.2
3,491,391	-				-0.2
3,491,395	+		Sama_2938	0.10	+0.8
3,491,436	+		Sama_2938	0.12	+0.2
3,491,437	-		Sama_2938	0.12	-1.8
3,491,437	-		Sama_2938	0.12	-0.2
3,491,524	+		Sama_2938	0.16	-1.7
3,491,524	+		Sama_2938	0.16	+1.4
3,491,525	-		Sama_2938	0.16	-1.7
3,491,525	-		Sama_2938	0.16	+0.6
3,491,525	-		Sama_2938	0.16	-0.5
3,491,525	-		Sama_2938	0.16	-0.4
3,491,553	+		Sama_2938	0.17	-1.4
3,491,554	-		Sama_2938	0.17	-0.6
3,491,554	-		Sama_2938	0.17	-0.3
3,491,554	-		Sama_2938	0.17	+0.8
3,491,575	-		Sama_2938	0.18	-1.1
3,491,592	+		Sama_2938	0.19	-1.3
3,491,593	-		Sama_2938	0.19	+1.4
3,491,653	-		Sama_2938	0.22	+0.1
3,491,653	-		Sama_2938	0.22	+0.7
3,491,670	-		Sama_2938	0.23	-1.2
3,491,673	+		Sama_2938	0.23	+0.3
3,491,673	+		Sama_2938	0.23	-0.8
3,491,673	+		Sama_2938	0.23	+0.5
3,491,673	+		Sama_2938	0.23	-0.6
3,491,673	+		Sama_2938	0.23	-0.6
3,491,673	+		Sama_2938	0.23	-0.6
3,491,674	-		Sama_2938	0.23	-0.6
3,491,745	+		Sama_2938	0.26	+0.5
3,491,745	+		Sama_2938	0.26	+0.3
3,491,745	+		Sama_2938	0.26	+0.4
3,491,745	+		Sama_2938	0.26	+0.3
3,491,745	+		Sama_2938	0.26	+0.1
3,491,745	+		Sama_2938	0.26	+2.4
3,491,745	+		Sama_2938	0.26	-0.1
3,491,745	+		Sama_2938	0.26	-1.3
3,491,745	+		Sama_2938	0.26	+0.2
3,491,745	+		Sama_2938	0.26	+0.7
3,491,746	-		Sama_2938	0.26	+0.4
3,491,746	-		Sama_2938	0.26	-0.4
3,491,746	-		Sama_2938	0.26	+0.1
3,491,746	-		Sama_2938	0.26	-1.7
3,491,746	-		Sama_2938	0.26	-1.5
3,491,746	-		Sama_2938	0.26	+1.4
3,491,746	-		Sama_2938	0.26	-1.1
3,491,746	-		Sama_2938	0.26	-0.2
3,491,746	-		Sama_2938	0.26	+4.7
3,491,746	-		Sama_2938	0.26	+0.1
3,491,746	-		Sama_2938	0.26	-0.4
3,491,746	-		Sama_2938	0.26	+0.8
3,491,821	+		Sama_2938	0.29	+1.1
3,491,821	+		Sama_2938	0.29	-0.2
3,491,822	-		Sama_2938	0.29	-2.0
3,491,856	+		Sama_2938	0.31	+1.4
3,491,856	+		Sama_2938	0.31	+0.4
3,491,857	-		Sama_2938	0.31	-0.7
3,491,857	-		Sama_2938	0.31	-1.7
3,491,857	-		Sama_2938	0.31	-0.7
3,491,857	-		Sama_2938	0.31	-1.2
3,491,857	-		Sama_2938	0.31	-0.2
3,491,857	-		Sama_2938	0.31	-1.9
3,491,857	-		Sama_2938	0.31	+1.3
3,491,857	-		Sama_2938	0.31	-0.7
3,491,878	+		Sama_2938	0.32	+0.1
3,491,878	+		Sama_2938	0.32	+0.1
3,491,879	-		Sama_2938	0.32	-0.2
3,491,879	-		Sama_2938	0.32	+0.4
3,491,879	-		Sama_2938	0.32	-0.2
3,491,879	-		Sama_2938	0.32	-0.5
3,491,879	-		Sama_2938	0.32	-0.7
3,491,909	-		Sama_2938	0.33	+0.1
3,491,961	+		Sama_2938	0.36	-0.6
3,491,984	+		Sama_2938	0.37	+0.1
3,491,984	+		Sama_2938	0.37	-1.8
3,491,984	+		Sama_2938	0.37	+2.4
3,491,984	+		Sama_2938	0.37	-0.2
3,491,985	-		Sama_2938	0.37	+2.2
3,491,985	-		Sama_2938	0.37	+1.4
3,491,987	+		Sama_2938	0.37	+1.1
3,491,987	+		Sama_2938	0.37	+1.4
3,491,987	+		Sama_2938	0.37	-1.1
3,491,987	+		Sama_2938	0.37	-1.5
3,491,987	+		Sama_2938	0.37	+0.3
3,491,987	+		Sama_2938	0.37	+0.2
3,491,987	+		Sama_2938	0.37	-0.2
3,491,987	+		Sama_2938	0.37	-0.3
3,491,987	+		Sama_2938	0.37	-0.2
3,491,987	+		Sama_2938	0.37	-1.0
3,491,987	+		Sama_2938	0.37	-0.3
3,491,987	+		Sama_2938	0.37	+0.5
3,491,987	+		Sama_2938	0.37	+1.4
3,491,987	+		Sama_2938	0.37	-0.7
3,491,988	-		Sama_2938	0.37	-0.9
3,491,988	-		Sama_2938	0.37	+1.8
3,491,988	-		Sama_2938	0.37	-0.0
3,491,988	-		Sama_2938	0.37	+0.1
3,491,988	-		Sama_2938	0.37	+0.7
3,491,988	-		Sama_2938	0.37	+1.1
3,491,988	-		Sama_2938	0.37	-0.2
3,491,988	-		Sama_2938	0.37	+1.4
3,491,988	-		Sama_2938	0.37	-0.5
3,491,988	-		Sama_2938	0.37	+1.4
3,491,988	-		Sama_2938	0.37	+0.8
3,491,988	-		Sama_2938	0.37	+0.8
3,491,988	-		Sama_2938	0.37	-0.0
3,491,988	-		Sama_2938	0.37	+1.7
3,491,988	-		Sama_2938	0.37	+0.5
3,491,988	-		Sama_2938	0.37	-0.2
3,491,988	-		Sama_2938	0.37	-0.2
3,491,996	+		Sama_2938	0.37	-1.5
3,492,041	-		Sama_2938	0.39	-0.7
3,492,052	+		Sama_2938	0.40	+0.4
3,492,052	+		Sama_2938	0.40	-1.2
3,492,052	+		Sama_2938	0.40	+0.1
3,492,053	-		Sama_2938	0.40	+0.4
3,492,150	+		Sama_2938	0.44	-0.0
3,492,150	+		Sama_2938	0.44	+1.5
3,492,151	-		Sama_2938	0.44	+0.1
3,492,151	-		Sama_2938	0.44	-1.4
3,492,159	+		Sama_2938	0.45	+0.3
3,492,160	-		Sama_2938	0.45	+1.4
3,492,160	-		Sama_2938	0.45	+0.6
3,492,160	-		Sama_2938	0.45	+0.4
3,492,237	+		Sama_2938	0.48	-0.2
3,492,237	+		Sama_2938	0.48	+3.2
3,492,238	-		Sama_2938	0.48	-1.2
3,492,238	-		Sama_2938	0.48	-0.2
3,492,238	-		Sama_2938	0.48	-1.6
3,492,238	-		Sama_2938	0.48	-0.2
3,492,266	-		Sama_2938	0.49	-1.3
3,492,298	+		Sama_2938	0.51	-0.2
3,492,299	-		Sama_2938	0.51	+1.4
3,492,361	-		Sama_2938	0.54	-0.9
3,492,361	-		Sama_2938	0.54	+1.2
3,492,361	-		Sama_2938	0.54	+0.0
3,492,361	-		Sama_2938	0.54	-0.1
3,492,398	-		Sama_2938	0.55	+0.5
3,492,433	+		Sama_2938	0.57	-0.9
3,492,436	+		Sama_2938	0.57	+14.1
3,492,436	+		Sama_2938	0.57	-0.0
3,492,437	-		Sama_2938	0.57	+1.0
3,492,437	-		Sama_2938	0.57	+0.1
3,492,437	-		Sama_2938	0.57	+0.4
3,492,437	-		Sama_2938	0.57	-0.2
3,492,474	+		Sama_2938	0.59	-0.3
3,492,497	+		Sama_2938	0.60	+0.3
3,492,497	+		Sama_2938	0.60	+1.4
3,492,498	-		Sama_2938	0.60	+0.3
3,492,544	+		Sama_2938	0.62	-0.3
3,492,626	-		Sama_2938	0.66	+0.1
3,492,660	+		Sama_2938	0.67	-1.2
3,492,660	+		Sama_2938	0.67	-1.9
3,492,660	+		Sama_2938	0.67	-1.0
3,492,660	+		Sama_2938	0.67	-1.3
3,492,660	+		Sama_2938	0.67	+1.1
3,492,661	-		Sama_2938	0.67	-0.4
3,492,669	+		Sama_2938	0.68	+1.3
3,492,678	+		Sama_2938	0.68	-0.2
3,492,679	-		Sama_2938	0.68	-1.7
3,492,679	-		Sama_2938	0.68	-0.3
3,492,726	+		Sama_2938	0.70	+0.3
3,492,727	-		Sama_2938	0.70	+1.0
3,492,727	-		Sama_2938	0.70	+1.4
3,492,730	+		Sama_2938	0.70	-0.9
3,492,730	+		Sama_2938	0.70	-0.4
3,492,731	-		Sama_2938	0.70	+1.0
3,492,731	-		Sama_2938	0.70	-0.7
3,492,751	+		Sama_2938	0.71	+1.4
3,492,751	+		Sama_2938	0.71	+3.4
3,492,777	+		Sama_2938	0.72	+0.1
3,492,795	+		Sama_2938	0.73	-0.6
3,492,795	+		Sama_2938	0.73	+0.4
3,492,795	+		Sama_2938	0.73	-0.7
3,492,795	+		Sama_2938	0.73	-1.4
3,492,795	+		Sama_2938	0.73	-0.7
3,492,795	+		Sama_2938	0.73	+0.8
3,492,795	+		Sama_2938	0.73	-1.6
3,492,795	+		Sama_2938	0.73	-1.2
3,492,795	+		Sama_2938	0.73	-0.4
3,492,795	+		Sama_2938	0.73	-0.6
3,492,795	+		Sama_2938	0.73	-1.5
3,492,795	+		Sama_2938	0.73	-0.9
3,492,795	+		Sama_2938	0.73	+0.4
3,492,796	-		Sama_2938	0.73	+0.4
3,492,796	-		Sama_2938	0.73	+1.0
3,492,796	-		Sama_2938	0.73	+0.3
3,492,796	-		Sama_2938	0.73	+0.1
3,492,796	-		Sama_2938	0.73	+0.8
3,492,796	-		Sama_2938	0.73	-0.1
3,492,798	+		Sama_2938	0.73	+0.4
3,492,798	+		Sama_2938	0.73	+1.1
3,492,798	+		Sama_2938	0.73	+1.4
3,492,799	-		Sama_2938	0.73	-1.2
3,492,799	-		Sama_2938	0.73	+0.8
3,492,822	+		Sama_2938	0.74	-0.6
3,492,822	+		Sama_2938	0.74	-0.6
3,492,822	+		Sama_2938	0.74	+0.4
3,492,824	+		Sama_2938	0.75	-0.9
3,492,824	+		Sama_2938	0.75	-0.1
3,492,824	+		Sama_2938	0.75	+0.1
3,492,824	+		Sama_2938	0.75	+1.8
3,492,824	+		Sama_2938	0.75	+0.1
3,492,824	+		Sama_2938	0.75	+0.7
3,492,825	-		Sama_2938	0.75	-1.5
3,492,825	-		Sama_2938	0.75	+0.8
3,492,825	-		Sama_2938	0.75	+0.0
3,492,837	+		Sama_2938	0.75	-0.8
3,492,888	-		Sama_2938	0.77	+1.4
3,492,888	-		Sama_2938	0.77	-0.2
3,492,888	-		Sama_2938	0.77	+1.8
3,492,888	-		Sama_2938	0.77	+0.7
3,492,897	+		Sama_2938	0.78	+0.8
3,492,898	-		Sama_2938	0.78	+1.0
3,492,972	+		Sama_2938	0.81	+0.6
3,492,972	+		Sama_2938	0.81	-0.8
3,492,972	+		Sama_2938	0.81	-0.2
3,492,972	+		Sama_2938	0.81	-1.4
3,492,972	+		Sama_2938	0.81	+0.4
3,492,972	+		Sama_2938	0.81	+1.6
3,492,973	-		Sama_2938	0.81	-0.6
3,492,973	-		Sama_2938	0.81	-0.6
3,492,973	-		Sama_2938	0.81	-0.7
3,492,973	-		Sama_2938	0.81	+0.3
3,492,973	-		Sama_2938	0.81	-2.3
3,492,973	-		Sama_2938	0.81	+0.0
3,492,973	-		Sama_2938	0.81	+1.4
3,492,973	-		Sama_2938	0.81	+0.1
3,492,974	+		Sama_2938	0.81	-0.9
3,492,974	+		Sama_2938	0.81	-2.6
3,492,975	-		Sama_2938	0.81	-0.4
3,492,975	-		Sama_2938	0.81	-1.4
3,493,065	+		Sama_2938	0.85	+0.1
3,493,065	+		Sama_2938	0.85	-0.6
3,493,066	-		Sama_2938	0.85	-0.2
3,493,066	-		Sama_2938	0.85	+0.8
3,493,080	+		Sama_2938	0.86	+1.0
3,493,081	-		Sama_2938	0.86	-0.2
3,493,081	-		Sama_2938	0.86	+1.2
3,493,081	-		Sama_2938	0.86	-0.7
3,493,189	+				+1.4
3,493,189	+				-1.0
3,493,264	+				+2.0
3,493,264	+				-1.3
3,493,264	+				-1.3
3,493,264	+				+1.0
3,493,264	+				-0.3
3,493,265	-				-0.7
3,493,265	-				+0.5
3,493,265	-				-0.7
3,493,265	-				-1.0
3,493,265	-				-0.4
3,493,265	-				-0.8
3,493,265	-				+0.1
3,493,265	-				-1.0
3,493,265	-				+0.1
3,493,333	+				-1.3
3,493,334	-				+1.4
3,493,334	-				-0.8
3,493,334	-				+0.8
3,493,334	-				-0.4
3,493,346	-				-0.8
3,493,381	+				-1.7
3,493,382	-				-0.2
3,493,382	-				-0.8
3,493,389	+				-1.1
3,493,389	+				+1.7
3,493,389	+				+0.3
3,493,389	+				+0.6
3,493,390	-				-0.7
3,493,390	-				-0.2
3,493,390	-				+1.2
3,493,413	+				-0.3
3,493,413	+				-1.0
3,493,414	-				-0.7
3,493,414	-				+0.8
3,493,473	-				+0.8
3,493,484	-				-1.3
3,493,484	-				+0.3
3,493,484	-				-1.9
3,493,484	-				+1.0
3,493,484	-				+0.2
3,493,484	-				-1.0
3,493,529	+				-0.2
3,493,557	+				-0.0
3,493,558	-				-0.4
3,493,677	+		Sama_2939	0.13	-1.7
3,493,678	-		Sama_2939	0.13	-0.7
3,493,678	-		Sama_2939	0.13	-0.2
3,493,757	-		Sama_2939	0.19	-0.2
3,493,757	-		Sama_2939	0.19	+0.8
3,493,767	+		Sama_2939	0.20	-0.2
3,493,767	+		Sama_2939	0.20	-0.3
3,493,768	-		Sama_2939	0.20	+0.6
3,493,768	-		Sama_2939	0.20	-0.0
3,493,847	-		Sama_2939	0.27	+0.3
3,493,847	-		Sama_2939	0.27	-0.4
3,493,941	+		Sama_2939	0.35	-0.4
3,493,942	-		Sama_2939	0.35	+0.4
3,493,942	-		Sama_2939	0.35	-1.0
3,493,942	-		Sama_2939	0.35	-1.3
3,494,021	+		Sama_2939	0.41	-1.1
3,494,021	+		Sama_2939	0.41	+0.7
3,494,021	+		Sama_2939	0.41	-0.3
3,494,022	-		Sama_2939	0.42	-1.2
3,494,022	-		Sama_2939	0.42	-0.4
3,494,022	-		Sama_2939	0.42	-0.6
3,494,022	-		Sama_2939	0.42	-0.3
3,494,022	-		Sama_2939	0.42	-0.9
3,494,022	-		Sama_2939	0.42	+0.1
3,494,022	-		Sama_2939	0.42	-1.5
3,494,022	-		Sama_2939	0.42	-0.2
3,494,022	-		Sama_2939	0.42	+0.8
3,494,091	-		Sama_2939	0.47	-0.0
3,494,109	+		Sama_2939	0.49	-0.4
3,494,109	+		Sama_2939	0.49	+0.3
3,494,109	+		Sama_2939	0.49	+1.4
3,494,110	-		Sama_2939	0.49	-0.6
3,494,110	-		Sama_2939	0.49	-1.0
3,494,134	-		Sama_2939	0.51	-0.2
3,494,134	-		Sama_2939	0.51	-0.7
3,494,134	-		Sama_2939	0.51	-1.3
3,494,137	+		Sama_2939	0.51	-2.0
3,494,137	+		Sama_2939	0.51	+1.4
3,494,137	+		Sama_2939	0.51	-1.7
3,494,148	+		Sama_2939	0.52	-0.4
3,494,148	+		Sama_2939	0.52	-0.2
3,494,149	-		Sama_2939	0.52	-1.6
3,494,149	-		Sama_2939	0.52	-0.2
3,494,286	+		Sama_2939	0.64	-0.4
3,494,335	-		Sama_2939	0.68	+1.7
3,494,378	-		Sama_2939	0.72	+1.2
3,494,378	-		Sama_2939	0.72	-2.0