Strain Fitness in Shewanella amazonensis SB2B around Sama_2550

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,057,702	+		Sama_2548	0.85	+0.6
3,057,703	-		Sama_2548	0.85	-1.1
3,057,720	+		Sama_2548	0.87	-0.8
3,057,721	-		Sama_2548	0.87	+1.6
3,057,721	-		Sama_2548	0.87	+0.0
3,057,764	+				+0.6
3,057,764	+				+0.9
3,057,764	+				-0.9
3,057,764	+				+1.2
3,057,764	+				-1.5
3,057,765	-				-1.8
3,057,765	-				-0.8
3,057,765	-				+0.2
3,057,765	-				-0.2
3,057,765	-				-0.5
3,057,795	+				-0.6
3,057,796	-				-0.4
3,057,809	+				-1.1
3,057,810	-				+0.0
3,057,822	+				-0.4
3,057,822	+				+0.6
3,057,872	-				-1.6
3,057,890	+				+0.4
3,057,890	+				+0.6
3,057,891	-				-0.7
3,057,891	-				+0.8
3,057,900	+				-0.8
3,057,900	+				-0.2
3,057,900	+				-1.1
3,057,900	+				-1.5
3,057,901	-				-0.3
3,057,901	-				+0.6
3,057,901	-				-0.7
3,057,984	+				+0.2
3,057,985	-				+1.2
3,057,985	-				-0.1
3,057,985	-				+0.2
3,057,985	-				-0.7
3,057,986	+				+2.8
3,057,987	-				-1.8
3,057,987	-				-1.8
3,057,987	-				+0.0
3,057,987	-				+0.4
3,057,987	-				+0.9
3,057,998	-				+0.6
3,058,037	+				+0.6
3,058,037	+				-0.5
3,058,037	+				+0.6
3,058,037	+				-1.0
3,058,037	+				+0.2
3,058,037	+				+0.2
3,058,037	+				+0.2
3,058,037	+				+1.6
3,058,038	-				+0.2
3,058,038	-				-1.4
3,058,038	-				+3.2
3,058,038	-				-1.6
3,058,038	-				-0.6
3,058,038	-				-0.8
3,058,038	-				+0.0
3,058,038	-				+0.1
3,058,038	-				+0.9
3,058,038	-				+0.9
3,058,038	-				-1.9
3,058,038	-				-0.1
3,058,038	-				-1.3
3,058,038	-				-0.5
3,058,038	-				-0.7
3,058,040	-				+0.8
3,058,040	-				+0.3
3,058,040	-				-0.5
3,058,040	-				-0.4
3,058,041	+				-2.9
3,058,041	+				-1.4
3,058,041	+				-1.6
3,058,041	+				-0.6
3,058,041	+				+3.8
3,058,041	+				-0.6
3,058,042	-				+1.8
3,058,042	-				-0.2
3,058,042	-				-0.7
3,058,042	-				+0.9
3,058,042	-				-1.0
3,058,042	-				+0.2
3,058,042	-				-1.3
3,058,042	-				+0.2
3,058,042	-				-0.2
3,058,042	-				+1.8
3,058,066	+		Sama_2549	0.12	+1.6
3,058,066	+		Sama_2549	0.12	-0.1
3,058,112	+		Sama_2549	0.19	-1.1
3,058,112	+		Sama_2549	0.19	-1.6
3,058,112	+		Sama_2549	0.19	+0.9
3,058,112	+		Sama_2549	0.19	+0.2
3,058,112	+		Sama_2549	0.19	-1.7
3,058,112	+		Sama_2549	0.19	-1.6
3,058,112	+		Sama_2549	0.19	-1.1
3,058,112	+		Sama_2549	0.19	-0.6
3,058,112	+		Sama_2549	0.19	+0.2
3,058,112	+		Sama_2549	0.19	-0.6
3,058,112	+		Sama_2549	0.19	-0.1
3,058,112	+		Sama_2549	0.19	-0.8
3,058,112	+		Sama_2549	0.19	+0.6
3,058,113	-		Sama_2549	0.19	+0.6
3,058,113	-		Sama_2549	0.19	-0.4
3,058,113	-		Sama_2549	0.19	+1.5
3,058,113	-		Sama_2549	0.19	+0.0
3,058,113	-		Sama_2549	0.19	-0.5
3,058,113	-		Sama_2549	0.19	-0.1
3,058,113	-		Sama_2549	0.19	-0.1
3,058,113	-		Sama_2549	0.19	+0.2
3,058,113	-		Sama_2549	0.19	-0.9
3,058,113	-		Sama_2549	0.19	-2.0
3,058,113	-		Sama_2549	0.19	-0.6
3,058,113	-		Sama_2549	0.19	-0.8
3,058,113	-		Sama_2549	0.19	-2.8
3,058,113	-		Sama_2549	0.19	+0.5
3,058,123	-		Sama_2549	0.21	-1.1
3,058,157	+		Sama_2549	0.26	-0.7
3,058,196	+		Sama_2549	0.31	-0.4
3,058,196	+		Sama_2549	0.31	+0.6
3,058,196	+		Sama_2549	0.31	-1.2
3,058,196	+		Sama_2549	0.31	+0.2
3,058,196	+		Sama_2549	0.31	-2.0
3,058,196	+		Sama_2549	0.31	+0.9
3,058,196	+		Sama_2549	0.31	-0.3
3,058,196	+		Sama_2549	0.31	-1.5
3,058,196	+		Sama_2549	0.31	-0.8
3,058,196	+		Sama_2549	0.31	+0.6
3,058,197	-		Sama_2549	0.31	-1.1
3,058,197	-		Sama_2549	0.31	-0.8
3,058,197	-		Sama_2549	0.31	+0.6
3,058,197	-		Sama_2549	0.31	-0.5
3,058,197	-		Sama_2549	0.31	-1.4
3,058,197	-		Sama_2549	0.31	+1.2
3,058,197	-		Sama_2549	0.31	-0.9
3,058,197	-		Sama_2549	0.31	-1.7
3,058,197	-		Sama_2549	0.31	+0.0
3,058,197	-		Sama_2549	0.31	-0.2
3,058,197	-		Sama_2549	0.31	+1.4
3,058,197	-		Sama_2549	0.31	-0.4
3,058,197	-		Sama_2549	0.31	-0.8
3,058,197	-		Sama_2549	0.31	-0.8
3,058,197	-		Sama_2549	0.31	+2.2
3,058,197	-		Sama_2549	0.31	-2.8
3,058,197	-		Sama_2549	0.31	-0.6
3,058,197	-		Sama_2549	0.31	+0.4
3,058,197	-		Sama_2549	0.31	-1.6
3,058,197	-		Sama_2549	0.31	+0.4
3,058,200	+		Sama_2549	0.32	+0.3
3,058,200	+		Sama_2549	0.32	-1.0
3,058,201	-		Sama_2549	0.32	+0.6
3,058,201	-		Sama_2549	0.32	+0.6
3,058,201	-		Sama_2549	0.32	-0.6
3,058,241	+		Sama_2549	0.38	-0.1
3,058,265	-		Sama_2549	0.41	-0.1
3,058,267	-		Sama_2549	0.42	+1.6
3,058,267	-		Sama_2549	0.42	+0.2
3,058,331	+		Sama_2549	0.51	-0.7
3,058,332	-		Sama_2549	0.51	-0.3
3,058,344	+		Sama_2549	0.53	-0.6
3,058,442	-		Sama_2549	0.67	-1.2
3,058,459	+		Sama_2549	0.70	+0.5
3,058,459	+		Sama_2549	0.70	-0.8
3,058,460	-		Sama_2549	0.70	+1.2
3,058,460	-		Sama_2549	0.70	-2.0
3,058,460	-		Sama_2549	0.70	-0.6
3,058,461	+		Sama_2549	0.70	+0.5
3,058,461	+		Sama_2549	0.70	+1.2
3,058,461	+		Sama_2549	0.70	+1.0
3,058,461	+		Sama_2549	0.70	-0.1
3,058,461	+		Sama_2549	0.70	-0.8
3,058,462	-		Sama_2549	0.70	-1.5
3,058,462	-		Sama_2549	0.70	-0.4
3,058,462	-		Sama_2549	0.70	+0.8
3,058,462	-		Sama_2549	0.70	-0.4
3,058,462	-		Sama_2549	0.70	-0.6
3,058,462	-		Sama_2549	0.70	-1.1
3,058,462	-		Sama_2549	0.70	+0.4
3,058,462	-		Sama_2549	0.70	-1.3
3,058,462	-		Sama_2549	0.70	-1.7
3,058,462	-		Sama_2549	0.70	-0.4
3,058,462	-		Sama_2549	0.70	+0.6
3,058,462	-		Sama_2549	0.70	+1.6
3,058,462	-		Sama_2549	0.70	+0.6
3,058,462	-		Sama_2549	0.70	+2.8
3,058,462	-		Sama_2549	0.70	-0.9
3,058,462	-		Sama_2549	0.70	+0.1
3,058,462	-		Sama_2549	0.70	+0.5
3,058,462	-		Sama_2549	0.70	-1.2
3,058,462	-		Sama_2549	0.70	-1.5
3,058,462	-		Sama_2549	0.70	+2.2
3,058,486	+		Sama_2549	0.74	-1.5
3,058,487	-		Sama_2549	0.74	-0.2
3,058,495	+		Sama_2549	0.75	-1.7
3,058,495	+		Sama_2549	0.75	-0.2
3,058,495	+		Sama_2549	0.75	-0.6
3,058,495	+		Sama_2549	0.75	-1.6
3,058,544	+		Sama_2549	0.82	-0.0
3,058,544	+		Sama_2549	0.82	-0.8
3,058,570	+		Sama_2549	0.86	+0.1
3,058,570	+		Sama_2549	0.86	+2.2
3,058,571	-		Sama_2549	0.86	-0.0
3,058,572	+		Sama_2549	0.86	+0.4
3,058,573	-		Sama_2549	0.87	+0.2
3,058,573	-		Sama_2549	0.87	-0.2
3,058,573	-		Sama_2549	0.87	-1.2
3,058,573	-		Sama_2549	0.87	-1.6
3,058,580	+		Sama_2549	0.88	+0.5
3,058,580	+		Sama_2549	0.88	+0.4
3,058,580	+		Sama_2549	0.88	-1.4
3,058,581	-		Sama_2549	0.88	-0.4
3,058,581	-		Sama_2549	0.88	-0.2
3,058,602	+				+0.6
3,058,603	-				-0.0
3,058,603	-				+1.0
3,058,619	+				+0.6
3,058,633	+				-0.1
3,058,787	+		Sama_2550	0.11	+0.0
3,058,787	+		Sama_2550	0.11	-0.0
3,058,787	+		Sama_2550	0.11	-0.4
3,058,852	+		Sama_2550	0.18	+0.6
3,058,852	+		Sama_2550	0.18	+1.1
3,058,853	-		Sama_2550	0.18	+0.4
3,058,922	-		Sama_2550	0.26	-0.8
3,058,928	+		Sama_2550	0.27	-2.4
3,058,928	+		Sama_2550	0.27	-0.7
3,058,929	-		Sama_2550	0.27	+0.8
3,058,929	-		Sama_2550	0.27	-0.6
3,058,932	+		Sama_2550	0.27	-1.1
3,058,932	+		Sama_2550	0.27	-2.3
3,058,932	+		Sama_2550	0.27	-0.9
3,058,932	+		Sama_2550	0.27	-1.0
3,058,932	+		Sama_2550	0.27	-0.1
3,058,932	+		Sama_2550	0.27	+0.9
3,058,932	+		Sama_2550	0.27	-1.7
3,058,932	+		Sama_2550	0.27	-1.9
3,058,933	-		Sama_2550	0.28	-0.2
3,058,933	-		Sama_2550	0.28	+1.6
3,058,933	-		Sama_2550	0.28	-0.1
3,058,933	-		Sama_2550	0.28	-0.9
3,058,933	-		Sama_2550	0.28	-0.4
3,058,933	-		Sama_2550	0.28	+0.6
3,058,933	-		Sama_2550	0.28	+0.2
3,058,933	-		Sama_2550	0.28	-1.4
3,058,933	-		Sama_2550	0.28	+0.1
3,058,936	+		Sama_2550	0.28	-1.5
3,058,936	+		Sama_2550	0.28	-0.1
3,058,937	-		Sama_2550	0.28	-1.1
3,058,937	-		Sama_2550	0.28	-0.2
3,058,937	-		Sama_2550	0.28	-0.6
3,058,937	-		Sama_2550	0.28	-0.6
3,058,979	+		Sama_2550	0.33	-0.1
3,058,979	+		Sama_2550	0.33	-1.1
3,058,980	-		Sama_2550	0.33	+0.5
3,058,987	-		Sama_2550	0.34	-0.5
3,059,025	-		Sama_2550	0.38	+0.6
3,059,025	-		Sama_2550	0.38	-0.9
3,059,025	-		Sama_2550	0.38	-0.7
3,059,028	+		Sama_2550	0.39	-0.4
3,059,028	+		Sama_2550	0.39	-0.6
3,059,028	+		Sama_2550	0.39	+0.2
3,059,029	-		Sama_2550	0.39	-0.9
3,059,138	-		Sama_2550	0.51	-0.8
3,059,248	+		Sama_2550	0.64	+0.4
3,059,251	+		Sama_2550	0.64	+0.9
3,059,252	-		Sama_2550	0.64	-2.6
3,059,252	-		Sama_2550	0.64	-0.8
3,059,289	-		Sama_2550	0.69	+0.5
3,059,338	+		Sama_2550	0.74	-0.5
3,059,339	-		Sama_2550	0.75	+1.2
3,059,424	-		Sama_2550	0.84	-0.6
3,059,424	-		Sama_2550	0.84	+0.1
3,059,428	+		Sama_2550	0.85	-1.9
3,059,428	+		Sama_2550	0.85	+0.3
3,059,428	+		Sama_2550	0.85	-0.2
3,059,429	-		Sama_2550	0.85	-2.0
3,059,429	-		Sama_2550	0.85	-0.8
3,059,429	-		Sama_2550	0.85	+0.5
3,059,454	-		Sama_2550	0.88	-0.8
3,059,454	-		Sama_2550	0.88	-1.2
3,059,514	+				+0.3
3,059,514	+				-0.5
3,059,515	-				-0.3
3,059,515	-				-0.2
3,059,541	+				-0.9
3,059,541	+				-1.4
3,059,541	+				-0.1
3,059,542	-				+0.3
3,059,542	-				-0.9
3,059,542	-				+0.5
3,059,559	+				+0.8
3,059,560	-				+1.2
3,059,560	-				-0.8
3,059,625	+				+0.6
3,059,647	+				-0.5
3,059,647	+				+0.8
3,059,647	+				+0.6
3,059,687	+				+0.3
3,059,688	-				+1.1
3,059,721	+				-0.9
3,059,721	+				-0.7
3,059,722	-				-0.4
3,059,722	-				-1.2
3,059,722	-				-0.0
3,059,772	+		Sama_2551	0.13	-0.3
3,059,773	-		Sama_2551	0.13	+0.6
3,059,909	+		Sama_2551	0.27	-2.6
3,059,910	-		Sama_2551	0.27	-0.8
3,059,910	-		Sama_2551	0.27	+0.4
3,059,946	-		Sama_2551	0.30	-0.8
3,059,946	-		Sama_2551	0.30	-2.3
3,060,009	-		Sama_2551	0.37	+0.4
3,060,046	+		Sama_2551	0.41	+0.6
3,060,046	+		Sama_2551	0.41	+0.4
3,060,046	+		Sama_2551	0.41	-1.3
3,060,046	+		Sama_2551	0.41	+0.4
3,060,047	-		Sama_2551	0.41	+0.6
3,060,047	-		Sama_2551	0.41	+0.6
3,060,107	+		Sama_2551	0.47	-0.4
3,060,108	-		Sama_2551	0.47	+2.8
3,060,108	-		Sama_2551	0.47	+1.0
3,060,109	+		Sama_2551	0.47	+0.6
3,060,109	+		Sama_2551	0.47	-0.5
3,060,109	+		Sama_2551	0.47	+2.2
3,060,110	-		Sama_2551	0.47	+0.6
3,060,151	+		Sama_2551	0.51	-0.2
3,060,151	+		Sama_2551	0.51	-0.6
3,060,151	+		Sama_2551	0.51	-0.1
3,060,152	-		Sama_2551	0.51	+0.6
3,060,152	-		Sama_2551	0.51	-0.4
3,060,152	-		Sama_2551	0.51	-1.7
3,060,152	-		Sama_2551	0.51	-0.3
3,060,222	+		Sama_2551	0.59	-1.8
3,060,222	+		Sama_2551	0.59	-0.1
3,060,223	-		Sama_2551	0.59	+0.2
3,060,223	-		Sama_2551	0.59	+0.6
3,060,383	-		Sama_2551	0.75	+0.9
3,060,383	-		Sama_2551	0.75	+0.5
3,060,383	-		Sama_2551	0.75	+1.8
3,060,406	+		Sama_2551	0.77	+0.2
3,060,413	-		Sama_2551	0.78	-0.8
3,060,413	-		Sama_2551	0.78	-0.1
3,060,459	+		Sama_2551	0.83	-1.7
3,060,460	-		Sama_2551	0.83	-0.8
3,060,460	-		Sama_2551	0.83	-0.6
3,060,467	-		Sama_2551	0.83	-0.6
3,060,467	-		Sama_2551	0.83	-0.2
3,060,488	+		Sama_2551	0.86	-0.7
3,060,489	-		Sama_2551	0.86	+0.9
3,060,489	-		Sama_2551	0.86	+0.8
3,060,489	-		Sama_2551	0.86	-1.7
3,060,489	-		Sama_2551	0.86	-0.3
3,060,504	-		Sama_2551	0.87	+1.2