Strain Fitness in Shewanella amazonensis SB2B around Sama_2325

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,787,582	+		Sama_2323	0.55	-0.8
2,787,583	-		Sama_2323	0.55	+0.8
2,787,591	+		Sama_2323	0.57	-0.1
2,787,592	-		Sama_2323	0.57	-1.0
2,787,613	+		Sama_2323	0.62	-0.4
2,787,613	+		Sama_2323	0.62	-0.3
2,787,613	+		Sama_2323	0.62	+0.0
2,787,614	-		Sama_2323	0.62	+0.2
2,787,614	-		Sama_2323	0.62	-1.0
2,787,687	+		Sama_2323	0.79	+1.0
2,787,688	-		Sama_2323	0.79	+0.0
2,787,693	+		Sama_2323	0.80	+0.4
2,787,693	+		Sama_2323	0.80	+0.4
2,787,693	+		Sama_2323	0.80	+0.7
2,787,694	-		Sama_2323	0.80	+0.0
2,787,694	-		Sama_2323	0.80	-2.1
2,787,715	+		Sama_2323	0.85	-0.3
2,787,715	+		Sama_2323	0.85	+1.0
2,787,716	-		Sama_2323	0.86	-0.8
2,787,720	-		Sama_2323	0.86	+1.0
2,787,728	-		Sama_2323	0.88	-1.0
2,787,733	+		Sama_2323	0.89	+0.7
2,787,751	+				+0.4
2,787,752	-				-0.3
2,787,752	-				-1.7
2,787,752	-				-0.6
2,787,792	+				-2.2
2,787,792	+				-0.1
2,787,792	+				+1.0
2,787,793	-				-0.2
2,787,793	-				-1.2
2,787,807	+				+0.0
2,787,833	+				-2.4
2,787,847	+				-1.1
2,787,848	-				-0.9
2,787,849	+				-0.1
2,787,849	+				-1.4
2,787,849	+				+2.0
2,787,849	+				-0.8
2,787,849	+				-1.9
2,787,849	+				+0.4
2,787,850	-				+0.8
2,787,850	-				-0.6
2,787,913	-				-0.2
2,787,913	-				-1.4
2,787,919	-				+0.7
2,787,960	+		Sama_2324	0.11	+0.7
2,787,961	-		Sama_2324	0.11	+0.0
2,787,961	-		Sama_2324	0.11	-0.6
2,787,961	-		Sama_2324	0.11	+0.6
2,787,965	-		Sama_2324	0.12	-0.3
2,787,965	-		Sama_2324	0.12	-1.3
2,788,005	+		Sama_2324	0.21	+0.0
2,788,005	+		Sama_2324	0.21	-0.3
2,788,006	-		Sama_2324	0.21	-2.0
2,788,006	-		Sama_2324	0.21	-0.8
2,788,006	-		Sama_2324	0.21	+1.0
2,788,006	-		Sama_2324	0.21	+0.7
2,788,049	+		Sama_2324	0.30	+0.8
2,788,062	-		Sama_2324	0.33	-1.7
2,788,191	-		Sama_2324	0.61	-0.8
2,788,292	+		Sama_2324	0.84	-0.2
2,788,293	-		Sama_2324	0.84	-1.6
2,788,293	-		Sama_2324	0.84	-0.7
2,788,293	-		Sama_2324	0.84	+0.0
2,788,293	-		Sama_2324	0.84	-1.0
2,788,296	+		Sama_2324	0.84	-1.2
2,788,296	+		Sama_2324	0.84	-0.1
2,788,296	+		Sama_2324	0.84	-1.0
2,788,297	-		Sama_2324	0.85	+0.0
2,788,297	-		Sama_2324	0.85	+2.0
2,788,297	-		Sama_2324	0.85	-0.7
2,788,350	+				-0.4
2,788,350	+				-1.1
2,788,351	-				-2.4
2,788,351	-				-1.0
2,788,412	+				-1.4
2,788,412	+				-1.1
2,788,418	+				+0.0
2,788,418	+				-1.9
2,788,418	+				+1.4
2,788,418	+				-0.3
2,788,418	+				+1.4
2,788,418	+				-1.1
2,788,419	-				-1.5
2,788,419	-				+0.6
2,788,419	-				+0.3
2,788,419	-				-0.8
2,788,419	-				-0.3
2,788,423	+				+2.3
2,788,454	+		Sama_2325	0.14	-1.1
2,788,463	+		Sama_2325	0.16	-1.1
2,788,546	+		Sama_2325	0.29	+0.6
2,788,547	-		Sama_2325	0.29	-0.1
2,788,574	+		Sama_2325	0.33	-0.1
2,788,574	+		Sama_2325	0.33	-1.4
2,788,574	+		Sama_2325	0.33	-0.4
2,788,575	-		Sama_2325	0.33	-0.6
2,788,575	-		Sama_2325	0.33	-0.8
2,788,660	-		Sama_2325	0.47	-0.6
2,788,693	+		Sama_2325	0.52	+0.0
2,788,694	-		Sama_2325	0.52	-0.4
2,788,694	-		Sama_2325	0.52	-2.2
2,788,694	-		Sama_2325	0.52	-0.6
2,788,699	-		Sama_2325	0.53	-1.7
2,788,703	+		Sama_2325	0.54	+1.8
2,788,738	+		Sama_2325	0.59	-1.3
2,788,739	-		Sama_2325	0.59	+1.0
2,788,761	+		Sama_2325	0.63	-1.9
2,788,822	+		Sama_2325	0.73	-1.3
2,788,823	-		Sama_2325	0.73	+0.7
2,788,823	-		Sama_2325	0.73	-0.9
2,788,823	-		Sama_2325	0.73	-2.0
2,788,840	+		Sama_2325	0.75	+0.0
2,788,840	+		Sama_2325	0.75	-1.6
2,788,841	-		Sama_2325	0.76	-2.4
2,788,853	-		Sama_2325	0.77	-0.8
2,788,853	-		Sama_2325	0.77	-1.5
2,788,853	-		Sama_2325	0.77	-1.6
2,788,912	+		Sama_2325	0.87	-0.6
2,788,913	-		Sama_2325	0.87	-0.8
2,788,913	-		Sama_2325	0.87	+0.7
2,788,913	-		Sama_2325	0.87	+0.2
2,788,916	-		Sama_2325	0.87	-1.0
2,788,996	-				-0.7
2,789,024	+				+0.1
2,789,025	-				+0.0
2,789,025	-				+0.4
2,789,061	-				-0.0
2,789,069	-				-2.1
2,789,069	-				+0.2
2,789,088	-				-0.4
2,789,093	-				-0.7
2,789,093	-				+1.0
2,789,093	-				-0.2
2,789,093	-				+1.0
2,789,150	+				-0.3
2,789,157	+				+0.5
2,789,202	+				-0.9
2,789,202	+				-0.4
2,789,202	+				+0.0
2,789,203	-				+0.6
2,789,203	-				+0.9
2,789,203	-				-0.4
2,789,281	-				+1.0
2,789,291	+				+0.4
2,789,291	+				+1.6
2,789,292	-				+0.7
2,789,306	+				+0.4
2,789,306	+				+0.9
2,789,415	-		Sama_2326	0.11	+0.6
2,789,431	+		Sama_2326	0.13	+0.7
2,789,431	+		Sama_2326	0.13	+0.4
2,789,432	-		Sama_2326	0.13	-0.6
2,789,432	-		Sama_2326	0.13	+1.0
2,789,475	+		Sama_2326	0.16	+0.9
2,789,475	+		Sama_2326	0.16	+0.5
2,789,475	+		Sama_2326	0.16	+1.3
2,789,475	+		Sama_2326	0.16	+0.5
2,789,476	-		Sama_2326	0.17	+0.8
2,789,476	-		Sama_2326	0.17	+1.3
2,789,476	-		Sama_2326	0.17	+1.3
2,789,476	-		Sama_2326	0.17	+1.0
2,789,476	-		Sama_2326	0.17	+0.6
2,789,476	-		Sama_2326	0.17	+1.7
2,789,476	-		Sama_2326	0.17	+0.8
2,789,499	+		Sama_2326	0.19	+0.9
2,789,500	-		Sama_2326	0.19	+0.3
2,789,540	+		Sama_2326	0.22	+1.2
2,789,540	+		Sama_2326	0.22	+1.2
2,789,541	-		Sama_2326	0.22	+0.6
2,789,541	-		Sama_2326	0.22	+0.4
2,789,583	-		Sama_2326	0.26	+0.8
2,789,632	-		Sama_2326	0.30	+1.2
2,789,632	-		Sama_2326	0.30	-1.0
2,789,705	+		Sama_2326	0.36	-0.1
2,789,727	-		Sama_2326	0.38	+0.4
2,789,757	+		Sama_2326	0.40	+1.7
2,789,757	+		Sama_2326	0.40	+1.7
2,789,758	-		Sama_2326	0.41	+0.7
2,789,878	+		Sama_2326	0.51	+2.0
2,789,879	-		Sama_2326	0.51	+1.2
2,789,879	-		Sama_2326	0.51	+0.4
2,789,879	-		Sama_2326	0.51	-0.6
2,789,932	+		Sama_2326	0.55	+1.7
2,789,933	-		Sama_2326	0.55	+0.3
2,789,945	+		Sama_2326	0.56	-1.1
2,789,946	-		Sama_2326	0.57	+0.8