Strain Fitness in Shewanella loihica PV-4 around Shew_3799

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,519,681	-		Shew_3798	0.14	-0.2
4,519,922	+		Shew_3798	0.42	-0.3
4,520,043	+		Shew_3798	0.55	+1.1
4,520,096	+		Shew_3798	0.62	-0.9
4,520,109	-		Shew_3798	0.63	-0.6
4,520,184	+		Shew_3798	0.72	+1.2
4,520,225	+		Shew_3798	0.76	-0.1
4,520,241	+		Shew_3798	0.78	-0.0
4,520,260	+		Shew_3798	0.80	-0.9
4,520,268	-		Shew_3798	0.81	-0.1
4,520,323	+		Shew_3798	0.88	-0.0
4,520,323	+		Shew_3798	0.88	-0.0
4,520,323	+		Shew_3798	0.88	-1.3
4,520,323	+		Shew_3798	0.88	+0.3
4,520,331	-		Shew_3798	0.88	+0.2
4,520,331	-		Shew_3798	0.88	-0.1
4,520,331	-		Shew_3798	0.88	+0.0
4,520,938	-		Shew_3799	0.58	-0.6
4,521,090	+		Shew_3799	0.80	-2.9
4,521,236	+				-0.2
4,521,544	+		Shew_3800	0.23	-3.0
4,521,760	-		Shew_3800	0.42	+0.8
4,521,827	-		Shew_3800	0.48	+0.0
4,521,838	+		Shew_3800	0.49	+0.8
4,521,846	-		Shew_3800	0.50	-0.2
4,521,958	-		Shew_3800	0.60	+0.8
4,521,958	-		Shew_3800	0.60	-0.0
4,521,963	-		Shew_3800	0.61	+0.4
4,521,976	+		Shew_3800	0.62	-0.1
4,522,120	+		Shew_3800	0.75	+0.2