Strain Fitness in Shewanella loihica PV-4 around Shew_3720

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,425,495	+				-0.0
4,425,520	+				+0.1
4,425,670	+		Shew_3719	0.40	-0.3
4,425,744	+		Shew_3719	0.56	+0.8
4,425,747	-		Shew_3719	0.56	-0.6
4,425,826	-		Shew_3719	0.73	-0.0
4,425,921	+				+0.3
4,425,927	+				+1.0
4,425,987	+				+0.8
4,426,068	+				-0.4
4,426,113	-				-0.9
4,426,121	+				-3.2
4,426,121	+				-1.4
4,426,121	+				-1.0
4,426,129	-				-0.6
4,426,129	-				+0.3
4,426,191	+				-0.2
4,426,258	+				+0.6
4,426,362	+		Shew_3720	0.15	-0.6
4,426,476	+		Shew_3720	0.24	-0.6
4,426,476	+		Shew_3720	0.24	-0.1
4,426,716	+		Shew_3720	0.42	-0.7
4,426,724	-		Shew_3720	0.42	-0.7
4,426,724	-		Shew_3720	0.42	-2.5
4,426,724	-		Shew_3720	0.42	-0.7
4,426,724	-		Shew_3720	0.42	+1.9
4,426,787	+		Shew_3720	0.47	-0.5
4,427,058	+		Shew_3720	0.67	-0.9
4,427,093	+		Shew_3720	0.70	-0.9
4,427,274	+		Shew_3720	0.83	-0.5
4,427,280	+		Shew_3720	0.84	-3.0
4,427,319	+		Shew_3720	0.87	-0.6
4,427,654	+				+0.4
4,427,790	+		Shew_3721	0.24	+0.7
4,427,919	-		Shew_3721	0.37	+0.3
4,427,972	+		Shew_3721	0.42	+0.7
4,427,972	+		Shew_3721	0.42	+0.7
4,428,267	+		Shew_3721	0.71	-1.3
4,428,326	-		Shew_3721	0.77	+0.8
4,428,497	-				-0.1