Strain Fitness in Shewanella loihica PV-4 around Shew_3714

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,417,359	+				+0.3
4,417,399	+				-0.2
4,417,481	-		Shew_3713	0.21	-0.3
4,417,512	-		Shew_3713	0.25	-0.7
4,417,519	-		Shew_3713	0.26	-0.5
4,417,575	-		Shew_3713	0.35	+1.2
4,417,575	-		Shew_3713	0.35	-0.5
4,417,875	-		Shew_3713	0.81	+0.2
4,419,294	-		Shew_3714	0.34	-0.2
4,419,294	-		Shew_3714	0.34	-0.2
4,419,294	-		Shew_3714	0.34	+0.4
4,420,339	-		Shew_3714	0.71	-0.2
4,420,374	-		Shew_3714	0.73	-1.6
4,420,374	-		Shew_3714	0.73	-0.6
4,420,505	+		Shew_3714	0.77	-0.6
4,420,569	-		Shew_3714	0.80	+1.4
4,421,137	+				-0.3
4,421,137	+				-0.2
4,421,190	+				+1.2
4,421,307	-				+0.7
4,421,508	+				+0.7
4,421,508	+				-0.6
4,421,514	-				-0.3
4,421,515	+				-1.4
4,421,516	-				+0.7
4,421,674	-				-3.6
4,421,683	+				-0.4
4,421,733	+				-0.1
4,421,846	-				-1.6
4,421,846	-				-0.3