Strain Fitness in Shewanella loihica PV-4 around Shew_3680

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,382,829	+		Shew_3679	0.42	+0.6
4,382,847	+		Shew_3679	0.45	+0.4
4,382,961	-		Shew_3679	0.62	-0.9
4,383,062	+		Shew_3679	0.77	+0.2
4,383,154	-				-0.1
4,383,336	-				-1.1
4,383,368	+		Shew_3680	0.15	-0.8
4,383,499	-		Shew_3680	0.44	-0.8
4,383,530	+		Shew_3680	0.50	-0.1
4,383,679	+		Shew_3680	0.82	-0.9
4,383,857	-				+0.3
4,383,993	-				-0.2
4,384,061	+				+0.9
4,384,114	+				+0.7
4,384,164	-				+0.8
4,384,278	+		Shew_3681	0.12	+1.0
4,384,310	-		Shew_3681	0.13	+1.7