Strain Fitness in Shewanella loihica PV-4 around Shew_3673

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
4,374,009	-				+0.4
4,374,208	-				-0.2
4,374,225	-				+0.4
4,374,241	-				-2.7
4,374,293	+				+0.5
4,374,342	+		Shew_3672	0.12	+0.7
4,374,342	+		Shew_3672	0.12	+0.1
4,374,342	+		Shew_3672	0.12	-1.1
4,374,350	-		Shew_3672	0.13	-0.2
4,374,350	-		Shew_3672	0.13	+0.4
4,374,368	-		Shew_3672	0.15	-1.1
4,374,391	-		Shew_3672	0.19	-0.0
4,374,466	+		Shew_3672	0.28	-0.4
4,374,466	+		Shew_3672	0.28	-0.7
4,374,466	+		Shew_3672	0.28	-0.4
4,374,466	+		Shew_3672	0.28	+0.0
4,374,466	+		Shew_3672	0.28	+0.0
4,374,474	-		Shew_3672	0.29	-1.6
4,374,528	-		Shew_3672	0.37	+0.1
4,374,554	+		Shew_3672	0.40	-0.0
4,374,591	-		Shew_3672	0.45	-0.4
4,374,591	-		Shew_3672	0.45	+0.1
4,374,639	+		Shew_3672	0.51	+0.8
4,374,830	+		Shew_3672	0.77	+0.2
4,375,184	+		Shew_3673	0.32	+0.1
4,375,189	+		Shew_3673	0.33	+0.5
4,375,189	+		Shew_3673	0.33	+0.2
4,375,449	+		Shew_3673	0.81	+1.4
4,375,675	+		Shew_3674	0.17	+0.2
4,375,683	-		Shew_3674	0.18	+0.0
4,376,126	+		Shew_3674	0.86	-0.3
4,376,126	+		Shew_3674	0.86	-0.4
4,376,334	-				+0.6
4,376,353	-				+0.9
4,376,489	+		Shew_3675	0.19	-2.8
4,376,497	-		Shew_3675	0.20	+0.4