Strain Fitness in Shewanella loihica PV-4 around Shew_3296

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
3,938,342	-		Shew_3295	0.45	+1.9
3,938,435	-		Shew_3295	0.53	+0.5
3,938,829	+		Shew_3295	0.89	+1.1
3,938,881	-				+1.6
3,939,029	+				+0.6
3,939,037	-				+0.2
3,939,171	-				+1.3
3,939,171	-				-0.3
3,939,301	+				-0.4
3,939,521	+		Shew_3296	0.19	-2.0
3,939,529	-		Shew_3296	0.20	-1.7
3,940,296	-		Shew_3296	0.76	-0.7
3,940,326	+		Shew_3296	0.79	-0.2
3,940,326	+		Shew_3296	0.79	+0.0
3,940,334	-		Shew_3296	0.79	-0.5
3,940,498	+				-1.2
3,940,526	+				-1.1
3,940,545	+				-0.3
3,940,553	-				-0.9
3,940,742	+				+0.1
3,940,812	-				-0.0
3,940,962	+		Shew_3297	0.20	-0.5
3,941,166	-		Shew_3297	0.38	-0.8
3,941,166	-		Shew_3297	0.38	+0.4
3,941,450	-		Shew_3297	0.65	-0.6