Strain Fitness in Shewanella loihica PV-4 around Shew_2996

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
3,555,290	-		Shew_2995	0.43	-0.4
3,555,496	+		Shew_2995	0.60	+0.6
3,555,776	-		Shew_2995	0.82	+0.3
3,555,934	-				-0.2
3,556,129	-				+0.7
3,556,215	-				-0.1
3,556,434	-				-0.1
3,556,504	+		Shew_2996	0.14	+0.8
3,556,504	+		Shew_2996	0.14	+1.9
3,556,512	-		Shew_2996	0.15	+0.0
3,556,517	-		Shew_2996	0.15	+0.0
3,556,520	-		Shew_2996	0.15	+0.8
3,556,575	-		Shew_2996	0.18	+0.0
3,556,708	-		Shew_2996	0.26	-0.3
3,556,850	-		Shew_2996	0.35	+0.2
3,557,167	-		Shew_2996	0.53	-0.0
3,557,371	+		Shew_2996	0.66	+1.0
3,557,377	-		Shew_2996	0.66	+0.5
3,557,439	+		Shew_2996	0.70	+0.0
3,557,589	+		Shew_2996	0.78	+0.4
3,557,636	-		Shew_2996	0.81	+0.0
3,557,636	-		Shew_2996	0.81	+0.2
3,557,927	-				+1.0
3,557,966	-				-0.1
3,558,026	+		Shew_2997	0.13	+0.0
3,558,034	-		Shew_2997	0.14	-0.2
3,558,042	-		Shew_2997	0.15	-0.1
3,558,184	+		Shew_2997	0.37	+0.4
3,558,184	+		Shew_2997	0.37	-1.6
3,558,192	-		Shew_2997	0.38	-0.4
3,558,192	-		Shew_2997	0.38	-0.8
3,558,220	+		Shew_2997	0.42	-0.3
3,558,332	+		Shew_2997	0.60	+0.7
3,558,340	-		Shew_2997	0.61	-0.1
3,558,391	+		Shew_2997	0.68	+0.2
3,558,415	-		Shew_2997	0.72	-0.1
3,558,760	+				+0.0
3,558,805	-		Shew_2998	0.14	-0.2