Strain Fitness in Shewanella loihica PV-4 around Shew_2525

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
2,976,439	-		Shew_2524	0.75	-1.3
2,976,770	-				+1.0
2,976,777	-				-0.6
2,976,779	+				-0.0
2,976,993	-				+1.1
2,977,072	-				+0.2
2,977,292	-				-0.1
2,977,292	-				+0.1
2,977,400	+				+1.0
2,977,527	-				+0.8
2,977,547	+				+0.0
2,977,708	-		Shew_2525	0.18	-0.6
2,977,757	-		Shew_2525	0.20	+0.4
2,977,757	-		Shew_2525	0.20	+0.1
2,978,113	-		Shew_2525	0.38	+0.3
2,978,127	+		Shew_2525	0.39	-0.6
2,978,408	-		Shew_2525	0.53	-0.3
2,978,485	+		Shew_2525	0.57	-1.0
2,978,618	-		Shew_2525	0.64	-1.9
2,978,692	+		Shew_2525	0.68	-2.7
2,978,871	-		Shew_2525	0.77	-1.5
2,978,893	-		Shew_2525	0.78	-2.5
2,978,905	+		Shew_2525	0.79	-0.5
2,979,001	+		Shew_2525	0.84	-1.4
2,979,106	+		Shew_2525	0.89	-2.1
2,979,114	-		Shew_2525	0.89	-0.9
2,979,487	-				-0.6
2,979,601	-		Shew_2526	0.20	+0.3
2,979,634	+		Shew_2526	0.23	+0.5
2,979,634	+		Shew_2526	0.23	+0.1
2,979,634	+		Shew_2526	0.23	+0.0
2,979,642	-		Shew_2526	0.24	-0.6
2,979,765	+		Shew_2526	0.36	-0.5
2,980,185	+		Shew_2526	0.79	-0.2
2,980,290	+		Shew_2526	0.89	+2.6
2,980,290	+		Shew_2526	0.89	+0.8
2,980,298	-				-1.0