Strain Fitness in Shewanella loihica PV-4 around Shew_2278

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
2,659,942	+		Shew_2276	0.78	+0.8
2,659,970	+		Shew_2276	0.81	+0.3
2,660,156	-				+0.2
2,660,240	-				-0.7
2,660,448	-		Shew_2277	0.49	-0.1
2,660,524	+		Shew_2277	0.66	-0.2
2,660,532	-		Shew_2277	0.68	+0.6
2,660,629	+		Shew_2277	0.90	+0.3
2,661,314	-		Shew_2278	0.41	-1.0
2,661,763	+				+0.3
2,661,763	+				-0.8
2,661,763	+				+0.1
2,661,763	+				+0.8
2,661,763	+				-0.7
2,661,763	+				+0.4
2,661,797	+				-0.0
2,662,007	-				+0.1
2,662,056	+				+0.1
2,662,140	-		Shew_2279	0.20	-0.1
2,662,317	+		Shew_2279	0.66	+0.1
2,662,329	+		Shew_2279	0.70	-1.2
2,662,329	+		Shew_2279	0.70	-0.0
2,662,337	-		Shew_2279	0.72	+1.1