Strain Fitness in Shewanella loihica PV-4 around Shew_2108

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
2,439,830	-				-0.2
2,440,786	+	fadE	Shew_2108	0.38	+2.1
2,441,164	+	fadE	Shew_2108	0.54	+1.6
2,441,164	+	fadE	Shew_2108	0.54	+0.1
2,441,587	-	fadE	Shew_2108	0.71	+0.8
2,441,999	+	fadE	Shew_2108	0.88	-0.0
2,441,999	+	fadE	Shew_2108	0.88	+0.5
2,442,146	+				+0.6
2,442,146	+				-0.5
2,442,682	-		Shew_2109	0.14	+0.8
2,442,752	+		Shew_2109	0.18	+0.7
2,442,844	-		Shew_2109	0.23	+0.8