Strain Fitness in Shewanella loihica PV-4 around Shew_2063
Experiment: Cephalothin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,381,331 | - | -0.0 | |||
2,381,663 | + | Shew_2062 | 0.31 | -0.3 | |
2,381,730 | + | Shew_2062 | 0.41 | +2.2 | |
2,381,978 | + | Shew_2062 | 0.77 | +0.2 | |
2,382,216 | - | Shew_2063 | 0.15 | -2.9 | |
2,382,559 | + | Shew_2063 | 0.74 | -1.1 | |
2,383,002 | - | -0.6 | |||
2,383,212 | + | Shew_2064 | 0.18 | -2.1 | |
2,383,341 | - | Shew_2064 | 0.25 | -0.9 |
Or see this region's nucleotide sequence