Strain Fitness in Shewanella loihica PV-4 around Shew_1851
Experiment: Cephalothin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,127,186 | - | Shew_1850 | 0.66 | +3.3 | |
2,127,191 | - | Shew_1850 | 0.66 | -0.9 | |
2,127,191 | - | Shew_1850 | 0.66 | +0.7 | |
2,127,327 | - | Shew_1850 | 0.72 | +1.6 | |
2,127,750 | - | Shew_1850 | 0.90 | +0.2 | |
2,127,750 | - | Shew_1850 | 0.90 | -0.7 | |
2,127,877 | + | -0.1 | |||
2,128,571 | - | Shew_1851 | 0.38 | -0.6 |
Or see this region's nucleotide sequence