Strain Fitness in Shewanella loihica PV-4 around Shew_R0033

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,546,954	+		Shew_1336	0.27	-0.3
1,547,002	-		Shew_1336	0.31	+1.2
1,547,040	+		Shew_1336	0.33	+0.6
1,547,045	-		Shew_1336	0.34	-0.1
1,547,048	-		Shew_1336	0.34	-0.3
1,547,048	+		Shew_1336	0.34	+0.4
1,547,199	-		Shew_1336	0.46	+0.4
1,547,263	+		Shew_1336	0.51	-0.2
1,547,425	-		Shew_1336	0.63	-1.0
1,547,457	+		Shew_1336	0.66	+0.4
1,547,465	-		Shew_1336	0.66	-1.2
1,547,551	+		Shew_1336	0.73	+0.9
1,547,551	+		Shew_1336	0.73	+0.1
1,547,551	+		Shew_1336	0.73	+2.4
1,547,652	-		Shew_1336	0.81	-0.9
1,547,905	-				+0.1
1,548,010	-		Shew_R0033	0.76	-1.0
1,548,413	-		Shew_1337	0.27	-2.9
1,548,525	+		Shew_1337	0.36	+1.6
1,548,525	+		Shew_1337	0.36	+0.2
1,548,533	-		Shew_1337	0.37	-0.4
1,548,533	-		Shew_1337	0.37	+0.2
1,548,533	-		Shew_1337	0.37	+1.0
1,548,617	+		Shew_1337	0.44	-0.3
1,548,685	+		Shew_1337	0.50	+0.1
1,548,923	+		Shew_1337	0.71	+0.7
1,548,924	-		Shew_1337	0.71	+0.6
1,548,931	-		Shew_1337	0.71	-0.0