Strain Fitness in Shewanella loihica PV-4 around Shew_1259

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,454,089	-		Shew_1257	0.29	+0.3
1,454,167	-		Shew_1257	0.45	-1.4
1,454,360	-		Shew_1257	0.86	-0.8
1,454,440	-				-0.3
1,454,440	-				-0.9
1,454,510	+				+0.2
1,454,527	+				-0.4
1,454,527	+				-0.2
1,454,673	-		Shew_1258	0.40	-0.2
1,454,958	-				-0.4
1,455,085	+		Shew_1259	0.11	-0.4
1,455,118	+		Shew_1259	0.31	-1.2
1,455,383	+				-0.2
1,455,391	-				-0.2
1,455,565	+				-0.5
1,455,581	-				-0.5
1,455,626	+				-0.8
1,455,733	+				+0.8
1,455,830	+		Shew_1260	0.11	-0.0
1,456,060	-		Shew_1260	0.21	-1.7
1,456,100	+		Shew_1260	0.23	-0.3