Strain Fitness in Shewanella loihica PV-4 around Shew_1231

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,429,538	+				+0.1
1,429,642	+		Shew_1230	0.24	+0.6
1,429,642	+		Shew_1230	0.24	-0.3
1,429,845	-		Shew_1230	0.64	-0.4
1,430,409	+				+0.4
1,430,614	-		Shew_1231	0.25	-0.2
1,430,677	-		Shew_1231	0.36	-1.1
1,431,131	+				-1.6
1,431,618	+		Shew_1232	0.73	+0.2
1,431,618	+		Shew_1232	0.73	+0.6
1,431,626	-		Shew_1232	0.74	-0.1
1,431,694	-		Shew_1232	0.83	+0.5
1,431,987	-		Shew_1233	0.23	-0.1