Strain Fitness in Shewanella loihica PV-4 around Shew_1117

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,291,329	-		Shew_1116	0.50	-0.1
1,291,329	-		Shew_1116	0.50	-0.3
1,291,343	-		Shew_1116	0.52	+0.0
1,291,532	-		Shew_1116	0.73	+2.0
1,291,592	-		Shew_1116	0.80	-0.5
1,291,789	+				-0.7
1,292,031	+		Shew_1117	0.17	+0.0
1,292,235	+		Shew_1117	0.35	-0.8
1,292,243	-		Shew_1117	0.35	+0.9
1,292,373	+		Shew_1117	0.47	+1.3
1,292,547	-		Shew_1117	0.62	+0.0
1,292,688	+		Shew_1117	0.75	-0.5
1,292,858	+		Shew_1117	0.90	-0.7
1,292,899	+				+0.3
1,292,899	+				-0.5
1,293,076	-				-0.2
1,293,318	+		Shew_1118	0.15	+0.3
1,293,419	+		Shew_1118	0.24	-0.3
1,293,940	+		Shew_1118	0.69	-1.3
1,293,953	-		Shew_1118	0.70	-0.1