Strain Fitness in Shewanella loihica PV-4 around Shew_1006

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
1,162,025	+				+0.9
1,162,147	+				+0.3
1,162,155	-				+0.4
1,162,221	+		Shew_1005	0.17	-0.6
1,162,673	+		Shew_1005	0.71	-0.2
1,162,710	+		Shew_1005	0.76	-0.2
1,162,718	-		Shew_1005	0.77	-0.4
1,162,718	-		Shew_1005	0.77	-0.1
1,162,718	-		Shew_1005	0.77	-0.7
1,162,732	-		Shew_1005	0.79	-0.9
1,163,170	+		Shew_1006	0.18	-0.0
1,163,982	-				+0.5
1,164,079	-				-0.1
1,164,440	-		Shew_1007	0.75	-2.7