Strain Fitness in Shewanella loihica PV-4 around Shew_0966
Experiment: Cephalothin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,107,731 | - | Shew_0965 | 0.45 | +0.2 | |
1,107,756 | - | Shew_0965 | 0.47 | +0.4 | |
1,107,906 | + | Shew_0965 | 0.57 | -0.4 | |
1,107,963 | + | Shew_0965 | 0.61 | -0.8 | |
1,108,378 | - | Shew_0965 | 0.89 | -0.7 | |
1,108,883 | - | Shew_0966 | 0.21 | -1.0 | |
1,109,253 | - | Shew_0966 | 0.49 | -1.6 | |
1,109,909 | - | -0.0 | |||
1,110,323 | + | -0.1 | |||
1,110,323 | + | +0.6 | |||
1,110,511 | + | Shew_0967 | 0.22 | -0.4 | |
1,110,703 | - | Shew_0967 | 0.35 | -0.6 |
Or see this region's nucleotide sequence