Strain Fitness in Shewanella loihica PV-4 around Shew_0212

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
225,702	+		Shew_0210	0.55	-1.9
225,702	+		Shew_0210	0.55	-0.2
225,702	+		Shew_0210	0.55	-0.3
225,710	-		Shew_0210	0.56	+0.4
225,710	-		Shew_0210	0.56	+0.5
225,825	-		Shew_0210	0.75	+0.4
225,837	-		Shew_0210	0.77	+0.5
226,204	+		Shew_0211	0.44	-0.0
226,271	+		Shew_0211	0.57	-0.7
226,289	-		Shew_0211	0.60	+1.1
226,380	-		Shew_0211	0.78	+0.2
226,480	-				+0.2
226,480	-				-0.5
226,572	-				-0.7
226,572	-				-1.1
226,620	-				+1.3
226,628	+				+0.2
226,640	+				+0.4
226,821	+		Shew_0212	0.15	-0.0
226,824	-		Shew_0212	0.15	-0.8
226,844	-		Shew_0212	0.16	+0.0
226,854	-		Shew_0212	0.16	-1.9
226,873	+		Shew_0212	0.17	+0.6
226,916	-		Shew_0212	0.19	+0.6
227,076	+		Shew_0212	0.27	-0.6
227,096	-		Shew_0212	0.28	+0.2
227,141	+		Shew_0212	0.30	-0.1
227,141	+		Shew_0212	0.30	-0.6
227,358	-		Shew_0212	0.41	-0.5
227,423	+		Shew_0212	0.44	-0.0
227,499	-		Shew_0212	0.48	-0.3
227,611	+		Shew_0212	0.53	-0.2
227,619	-		Shew_0212	0.54	-1.1
227,624	-		Shew_0212	0.54	+0.2
227,668	+		Shew_0212	0.56	+1.2
227,676	-		Shew_0212	0.56	-0.8
227,676	-		Shew_0212	0.56	+0.1
227,707	-		Shew_0212	0.58	+0.1
227,829	+		Shew_0212	0.64	-0.3
227,920	-		Shew_0212	0.68	-1.7
227,938	-		Shew_0212	0.69	-0.2
228,099	-		Shew_0212	0.77	+0.4
228,256	-		Shew_0212	0.85	+0.1
228,307	+		Shew_0212	0.87	+0.4
228,315	-		Shew_0212	0.88	-1.9
228,329	-		Shew_0212	0.88	+0.3
228,366	+				-0.1
228,381	-				+0.8
228,552	+				+0.3