Strain Fitness in Shewanella loihica PV-4 around Shew_0031

Experiment: Cephalothin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.05 mg/ml
32,285	+		Shew_0030	0.28	-0.2
32,293	-		Shew_0030	0.29	+0.0
32,293	-		Shew_0030	0.29	-0.1
32,336	-		Shew_0030	0.34	-0.1
32,585	+		Shew_0030	0.67	-0.3
32,604	+		Shew_0030	0.70	-0.1
32,815	-				-0.3
32,815	-				-0.0
32,862	-				-0.1
33,122	+				-4.5
33,148	+				-5.7
33,374	-		Shew_0031	0.10	-3.3
33,426	+		Shew_0031	0.15	-5.0
33,432	+		Shew_0031	0.15	-6.0
33,526	-		Shew_0031	0.23	-5.7
33,559	+		Shew_0031	0.26	-5.7
33,588	-		Shew_0031	0.29	-5.6
33,618	+		Shew_0031	0.31	-6.4
33,626	-		Shew_0031	0.32	-4.6
33,626	-		Shew_0031	0.32	-3.6
33,849	-		Shew_0031	0.51	-4.3
33,943	-		Shew_0031	0.59	-3.6
34,358	+				-7.9
34,366	-				-4.7
34,565	-				-5.1
34,585	+				-5.5
34,802	+		Shew_0032	0.12	-6.4
34,802	+		Shew_0032	0.12	-3.5
34,810	-		Shew_0032	0.12	-5.8
34,840	+		Shew_0032	0.13	-4.0
34,985	+		Shew_0032	0.18	-3.6
34,985	+		Shew_0032	0.18	-4.4
34,985	+		Shew_0032	0.18	-6.7
34,993	-		Shew_0032	0.18	-4.0
35,223	-		Shew_0032	0.25	-3.6
35,313	+		Shew_0032	0.28	-5.6
35,384	+		Shew_0032	0.30	-4.5
35,395	+		Shew_0032	0.31	-4.6