Strain Fitness in Marinobacter adhaerens HP15 around HP15_685

Experiment: L-Citrulline as (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntHP15_685 and HP15_686 are separated by 35 nucleotidesHP15_686 and HP15_687 are separated by 23 nucleotides HP15_685: HP15_685 - phage repressor, at 701,983 to 702,966 _685 HP15_686: HP15_686 - conserved hypothetical protein, at 703,002 to 703,913 _686 HP15_687: HP15_687 - protein containing domain of unknown function DUF1994, at 703,937 to 704,788 _687 Position (kb) 701 702 703Strain fitness (log2 ratio) -2 -1 0 1 2 3at 700.995 kb on + strandat 700.997 kb on + strandat 701.005 kb on + strandat 701.233 kb on + strandat 701.271 kb on + strandat 701.307 kb on + strandat 701.307 kb on + strandat 701.307 kb on + strandat 701.335 kb on + strandat 701.345 kb on + strandat 701.359 kb on + strandat 701.404 kb on + strandat 701.455 kb on + strandat 701.513 kb on + strandat 701.542 kb on + strandat 701.662 kb on + strandat 701.667 kb on + strandat 701.784 kb on + strandat 701.796 kb on + strandat 701.854 kb on + strandat 702.986 kb on + strandat 703.046 kb on - strandat 703.046 kb on - strandat 703.107 kb on + strand, within HP15_686at 703.147 kb on - strand, within HP15_686at 703.147 kb on - strand, within HP15_686at 703.279 kb on - strand, within HP15_686at 703.286 kb on + strand, within HP15_686at 703.294 kb on - strand, within HP15_686at 703.340 kb on - strand, within HP15_686at 703.344 kb on + strand, within HP15_686at 703.549 kb on + strand, within HP15_686at 703.551 kb on - strand, within HP15_686at 703.735 kb on + strand, within HP15_686at 703.735 kb on + strand, within HP15_686at 703.735 kb on + strand, within HP15_686at 703.735 kb on + strand, within HP15_686at 703.743 kb on - strand, within HP15_686

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline as (N)
remove
700,995 + -2.0
700,997 + +0.3
701,005 + +0.7
701,233 + -1.5
701,271 + -0.8
701,307 + +1.1
701,307 + +2.1
701,307 + +0.3
701,335 + +1.1
701,345 + +1.7
701,359 + +0.7
701,404 + -1.3
701,455 + +1.7
701,513 + +1.9
701,542 + +1.1
701,662 + +1.6
701,667 + +1.6
701,784 + -0.3
701,796 + +0.3
701,854 + +0.9
702,986 + +1.7
703,046 - +0.5
703,046 - -0.9
703,107 + HP15_686 0.12 +0.2
703,147 - HP15_686 0.16 +0.6
703,147 - HP15_686 0.16 +1.1
703,279 - HP15_686 0.30 -0.1
703,286 + HP15_686 0.31 +0.9
703,294 - HP15_686 0.32 +1.3
703,340 - HP15_686 0.37 +0.4
703,344 + HP15_686 0.38 +3.1
703,549 + HP15_686 0.60 -1.3
703,551 - HP15_686 0.60 +0.1
703,735 + HP15_686 0.80 +1.9
703,735 + HP15_686 0.80 +1.7
703,735 + HP15_686 0.80 -0.2
703,735 + HP15_686 0.80 +1.9
703,743 - HP15_686 0.81 -0.1

Or see this region's nucleotide sequence