Strain Fitness in Marinobacter adhaerens HP15 around HP15_672

Experiment: L-Citrulline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_671 and HP15_672 overlap by 8 nucleotidesHP15_672 and HP15_673 are separated by 3 nucleotides HP15_671: HP15_671 - phage portal protein, lambda family, at 690,569 to 692,146 _671 HP15_672: HP15_672 - conserved hypothetical protein, at 692,139 to 692,681 _672 HP15_673: HP15_673 - phage terminase GpA, at 692,685 to 694,646 _673 Position (kb) 692 693Strain fitness (log2 ratio) -2 -1 0 1 2 3at 691.203 kb on - strand, within HP15_671at 691.210 kb on + strand, within HP15_671at 691.226 kb on - strand, within HP15_671at 691.253 kb on + strand, within HP15_671at 691.254 kb on - strand, within HP15_671at 691.358 kb on + strand, within HP15_671at 691.374 kb on + strand, within HP15_671at 691.413 kb on - strand, within HP15_671at 691.624 kb on + strand, within HP15_671at 691.827 kb on + strand, within HP15_671at 691.827 kb on + strand, within HP15_671at 691.827 kb on + strand, within HP15_671at 691.891 kb on - strand, within HP15_671at 691.972 kb on + strand, within HP15_671at 692.019 kb on + strandat 692.019 kb on + strandat 692.027 kb on - strandat 692.027 kb on - strandat 692.092 kb on + strandat 692.150 kb on + strandat 692.157 kb on - strandat 692.204 kb on - strand, within HP15_672at 692.284 kb on - strand, within HP15_672at 692.301 kb on + strand, within HP15_672at 692.309 kb on - strand, within HP15_672at 692.503 kb on + strand, within HP15_672at 692.503 kb on + strand, within HP15_672at 692.506 kb on - strand, within HP15_672at 692.540 kb on - strand, within HP15_672at 692.540 kb on - strand, within HP15_672at 692.595 kb on - strand, within HP15_672at 692.848 kb on + strandat 692.856 kb on - strandat 692.856 kb on - strandat 692.856 kb on - strandat 692.970 kb on - strand, within HP15_673at 693.044 kb on + strand, within HP15_673at 693.052 kb on - strand, within HP15_673at 693.270 kb on - strand, within HP15_673at 693.320 kb on - strand, within HP15_673at 693.399 kb on + strand, within HP15_673at 693.421 kb on + strand, within HP15_673at 693.431 kb on + strand, within HP15_673at 693.441 kb on + strand, within HP15_673at 693.449 kb on - strand, within HP15_673at 693.554 kb on + strand, within HP15_673at 693.554 kb on + strand, within HP15_673at 693.654 kb on + strand, within HP15_673

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline as (N)
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691,203 - HP15_671 0.40 +2.5
691,210 + HP15_671 0.41 +1.1
691,226 - HP15_671 0.42 +0.3
691,253 + HP15_671 0.43 -0.0
691,254 - HP15_671 0.43 +0.1
691,358 + HP15_671 0.50 -0.0
691,374 + HP15_671 0.51 +2.8
691,413 - HP15_671 0.53 -0.2
691,624 + HP15_671 0.67 +1.8
691,827 + HP15_671 0.80 +2.4
691,827 + HP15_671 0.80 +1.8
691,827 + HP15_671 0.80 +0.7
691,891 - HP15_671 0.84 -0.6
691,972 + HP15_671 0.89 +0.2
692,019 + -0.7
692,019 + +0.0
692,027 - +0.0
692,027 - -0.3
692,092 + +1.8
692,150 + -0.6
692,157 - +0.3
692,204 - HP15_672 0.12 -0.5
692,284 - HP15_672 0.27 -0.6
692,301 + HP15_672 0.30 -1.2
692,309 - HP15_672 0.31 -0.3
692,503 + HP15_672 0.67 -0.3
692,503 + HP15_672 0.67 -1.1
692,506 - HP15_672 0.68 -0.6
692,540 - HP15_672 0.74 +1.4
692,540 - HP15_672 0.74 -0.8
692,595 - HP15_672 0.84 +0.7
692,848 + +1.5
692,856 - +0.4
692,856 - -0.4
692,856 - -0.9
692,970 - HP15_673 0.15 +1.5
693,044 + HP15_673 0.18 +1.0
693,052 - HP15_673 0.19 +1.7
693,270 - HP15_673 0.30 -1.1
693,320 - HP15_673 0.32 -0.7
693,399 + HP15_673 0.36 +1.3
693,421 + HP15_673 0.38 -0.7
693,431 + HP15_673 0.38 -0.5
693,441 + HP15_673 0.39 -1.9
693,449 - HP15_673 0.39 +1.1
693,554 + HP15_673 0.44 -0.2
693,554 + HP15_673 0.44 -1.5
693,654 + HP15_673 0.49 +1.2

Or see this region's nucleotide sequence