Strain Fitness in Marinobacter adhaerens HP15 around HP15_3756

Experiment: L-Citrulline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3755 and HP15_3756 overlap by 4 nucleotidesHP15_3756 and HP15_3757 are separated by 55 nucleotidesHP15_3757 and HP15_3758 are separated by 65 nucleotides HP15_3755: HP15_3755 - sulfatase, at 3,974,748 to 3,976,298 _3755 HP15_3756: HP15_3756 - glucosyltransferase MdoH, at 3,976,295 to 3,978,337 _3756 HP15_3757: HP15_3757 - hypothetical protein, at 3,978,393 to 3,978,638 _3757 HP15_3758: HP15_3758 - transferase hexapeptide repeat protein, at 3,978,704 to 3,979,168 _3758 Position (kb) 3976 3977 3978 3979Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3975.314 kb on - strand, within HP15_3755at 3975.358 kb on + strand, within HP15_3755at 3975.366 kb on - strand, within HP15_3755at 3975.366 kb on - strand, within HP15_3755at 3975.371 kb on - strand, within HP15_3755at 3975.371 kb on - strand, within HP15_3755at 3975.394 kb on + strand, within HP15_3755at 3975.396 kb on + strand, within HP15_3755at 3975.396 kb on + strand, within HP15_3755at 3975.396 kb on + strand, within HP15_3755at 3975.401 kb on + strand, within HP15_3755at 3975.404 kb on - strand, within HP15_3755at 3975.409 kb on - strand, within HP15_3755at 3975.441 kb on - strand, within HP15_3755at 3975.444 kb on + strand, within HP15_3755at 3975.511 kb on + strand, within HP15_3755at 3975.511 kb on + strand, within HP15_3755at 3975.511 kb on + strand, within HP15_3755at 3975.511 kb on + strand, within HP15_3755at 3975.511 kb on + strand, within HP15_3755at 3975.519 kb on - strand, within HP15_3755at 3975.519 kb on - strand, within HP15_3755at 3975.575 kb on + strand, within HP15_3755at 3975.810 kb on + strand, within HP15_3755at 3975.836 kb on - strand, within HP15_3755at 3975.871 kb on + strand, within HP15_3755at 3975.885 kb on + strand, within HP15_3755at 3975.942 kb on + strand, within HP15_3755at 3975.947 kb on + strand, within HP15_3755at 3975.950 kb on - strand, within HP15_3755at 3975.995 kb on - strand, within HP15_3755at 3976.005 kb on - strand, within HP15_3755at 3976.005 kb on - strand, within HP15_3755at 3976.012 kb on - strand, within HP15_3755at 3976.012 kb on - strand, within HP15_3755at 3976.012 kb on - strand, within HP15_3755at 3976.059 kb on + strand, within HP15_3755at 3976.072 kb on - strand, within HP15_3755at 3976.166 kb on + strandat 3976.257 kb on - strandat 3976.290 kb on - strandat 3976.305 kb on + strandat 3976.306 kb on + strandat 3976.313 kb on - strandat 3976.324 kb on + strandat 3976.449 kb on + strandat 3976.457 kb on + strandat 3976.494 kb on + strandat 3976.607 kb on + strand, within HP15_3756at 3976.607 kb on + strand, within HP15_3756at 3976.621 kb on + strand, within HP15_3756at 3976.621 kb on + strand, within HP15_3756at 3976.631 kb on + strand, within HP15_3756at 3976.639 kb on - strand, within HP15_3756at 3976.645 kb on + strand, within HP15_3756at 3976.655 kb on + strand, within HP15_3756at 3976.655 kb on + strand, within HP15_3756at 3976.655 kb on + strand, within HP15_3756at 3976.656 kb on + strand, within HP15_3756at 3976.656 kb on + strand, within HP15_3756at 3976.663 kb on - strand, within HP15_3756at 3976.663 kb on - strand, within HP15_3756at 3976.721 kb on + strand, within HP15_3756at 3976.760 kb on - strand, within HP15_3756at 3976.765 kb on - strand, within HP15_3756at 3976.765 kb on - strand, within HP15_3756at 3976.765 kb on - strand, within HP15_3756at 3976.885 kb on + strand, within HP15_3756at 3976.924 kb on - strand, within HP15_3756at 3976.929 kb on - strand, within HP15_3756at 3976.929 kb on - strand, within HP15_3756at 3976.963 kb on + strand, within HP15_3756at 3976.971 kb on + strand, within HP15_3756at 3977.000 kb on + strand, within HP15_3756at 3977.040 kb on + strand, within HP15_3756at 3977.048 kb on - strand, within HP15_3756at 3977.048 kb on - strand, within HP15_3756at 3977.067 kb on - strand, within HP15_3756at 3977.104 kb on + strand, within HP15_3756at 3977.104 kb on + strand, within HP15_3756at 3977.112 kb on - strand, within HP15_3756at 3977.122 kb on + strand, within HP15_3756at 3977.150 kb on + strand, within HP15_3756at 3977.218 kb on + strand, within HP15_3756at 3977.315 kb on - strand, within HP15_3756at 3977.317 kb on + strand, within HP15_3756at 3977.434 kb on + strand, within HP15_3756at 3977.505 kb on - strand, within HP15_3756at 3977.513 kb on - strand, within HP15_3756at 3977.523 kb on - strand, within HP15_3756at 3977.550 kb on + strand, within HP15_3756at 3977.568 kb on - strand, within HP15_3756at 3977.573 kb on - strand, within HP15_3756at 3977.587 kb on + strand, within HP15_3756at 3977.631 kb on - strand, within HP15_3756at 3977.711 kb on + strand, within HP15_3756at 3977.711 kb on + strand, within HP15_3756at 3977.824 kb on + strand, within HP15_3756at 3977.922 kb on + strand, within HP15_3756at 3977.925 kb on - strand, within HP15_3756at 3977.968 kb on + strand, within HP15_3756at 3977.976 kb on - strand, within HP15_3756at 3977.978 kb on + strand, within HP15_3756at 3978.076 kb on + strand, within HP15_3756at 3978.126 kb on + strand, within HP15_3756at 3978.144 kb on - strandat 3978.154 kb on + strandat 3978.237 kb on + strandat 3978.403 kb on + strandat 3978.457 kb on - strand, within HP15_3757at 3978.462 kb on - strand, within HP15_3757at 3978.464 kb on + strand, within HP15_3757at 3978.464 kb on + strand, within HP15_3757at 3978.472 kb on - strand, within HP15_3757at 3978.472 kb on - strand, within HP15_3757at 3978.472 kb on - strand, within HP15_3757at 3978.554 kb on - strand, within HP15_3757at 3978.596 kb on + strand, within HP15_3757at 3978.597 kb on + strand, within HP15_3757at 3978.603 kb on - strand, within HP15_3757at 3978.603 kb on - strand, within HP15_3757at 3978.608 kb on - strand, within HP15_3757at 3978.623 kb on + strandat 3978.631 kb on - strandat 3978.662 kb on + strandat 3978.689 kb on + strandat 3978.689 kb on + strandat 3978.816 kb on + strand, within HP15_3758at 3978.917 kb on + strand, within HP15_3758at 3978.925 kb on - strand, within HP15_3758at 3978.948 kb on + strand, within HP15_3758at 3979.043 kb on + strand, within HP15_3758at 3979.043 kb on + strand, within HP15_3758at 3979.051 kb on - strand, within HP15_3758at 3979.066 kb on - strand, within HP15_3758at 3979.182 kb on + strandat 3979.190 kb on - strandat 3979.190 kb on - strandat 3979.250 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline as (N)
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3,975,314 - HP15_3755 0.36 -0.8
3,975,358 + HP15_3755 0.39 +0.0
3,975,366 - HP15_3755 0.40 -0.5
3,975,366 - HP15_3755 0.40 +0.2
3,975,371 - HP15_3755 0.40 +0.0
3,975,371 - HP15_3755 0.40 +1.7
3,975,394 + HP15_3755 0.42 -0.7
3,975,396 + HP15_3755 0.42 -0.2
3,975,396 + HP15_3755 0.42 -0.4
3,975,396 + HP15_3755 0.42 -0.0
3,975,401 + HP15_3755 0.42 +0.3
3,975,404 - HP15_3755 0.42 +2.3
3,975,409 - HP15_3755 0.43 +1.7
3,975,441 - HP15_3755 0.45 -0.1
3,975,444 + HP15_3755 0.45 -0.4
3,975,511 + HP15_3755 0.49 +1.6
3,975,511 + HP15_3755 0.49 +0.9
3,975,511 + HP15_3755 0.49 -0.2
3,975,511 + HP15_3755 0.49 +2.2
3,975,511 + HP15_3755 0.49 -0.5
3,975,519 - HP15_3755 0.50 +0.6
3,975,519 - HP15_3755 0.50 -0.9
3,975,575 + HP15_3755 0.53 +0.3
3,975,810 + HP15_3755 0.68 +1.7
3,975,836 - HP15_3755 0.70 +0.9
3,975,871 + HP15_3755 0.72 -0.3
3,975,885 + HP15_3755 0.73 -0.7
3,975,942 + HP15_3755 0.77 +1.6
3,975,947 + HP15_3755 0.77 +2.4
3,975,950 - HP15_3755 0.77 +1.4
3,975,995 - HP15_3755 0.80 -1.1
3,976,005 - HP15_3755 0.81 -1.4
3,976,005 - HP15_3755 0.81 -0.2
3,976,012 - HP15_3755 0.81 -0.1
3,976,012 - HP15_3755 0.81 -0.2
3,976,012 - HP15_3755 0.81 +0.8
3,976,059 + HP15_3755 0.85 -0.9
3,976,072 - HP15_3755 0.85 -0.7
3,976,166 + -0.4
3,976,257 - -1.8
3,976,290 - -1.1
3,976,305 + -0.9
3,976,306 + +1.0
3,976,313 - +1.6
3,976,324 + -0.1
3,976,449 + +1.3
3,976,457 + -0.4
3,976,494 + +0.6
3,976,607 + HP15_3756 0.15 -0.2
3,976,607 + HP15_3756 0.15 -1.0
3,976,621 + HP15_3756 0.16 +0.1
3,976,621 + HP15_3756 0.16 +1.1
3,976,631 + HP15_3756 0.16 +0.5
3,976,639 - HP15_3756 0.17 +1.6
3,976,645 + HP15_3756 0.17 -0.5
3,976,655 + HP15_3756 0.18 +1.0
3,976,655 + HP15_3756 0.18 -0.7
3,976,655 + HP15_3756 0.18 -0.6
3,976,656 + HP15_3756 0.18 +3.8
3,976,656 + HP15_3756 0.18 +0.4
3,976,663 - HP15_3756 0.18 +1.2
3,976,663 - HP15_3756 0.18 +0.0
3,976,721 + HP15_3756 0.21 +2.1
3,976,760 - HP15_3756 0.23 +1.0
3,976,765 - HP15_3756 0.23 +1.1
3,976,765 - HP15_3756 0.23 +0.2
3,976,765 - HP15_3756 0.23 +0.4
3,976,885 + HP15_3756 0.29 -0.2
3,976,924 - HP15_3756 0.31 +1.8
3,976,929 - HP15_3756 0.31 +2.6
3,976,929 - HP15_3756 0.31 -2.1
3,976,963 + HP15_3756 0.33 -0.1
3,976,971 + HP15_3756 0.33 +1.3
3,977,000 + HP15_3756 0.35 +0.4
3,977,040 + HP15_3756 0.36 -0.7
3,977,048 - HP15_3756 0.37 -0.3
3,977,048 - HP15_3756 0.37 -0.7
3,977,067 - HP15_3756 0.38 +0.4
3,977,104 + HP15_3756 0.40 +1.0
3,977,104 + HP15_3756 0.40 +1.6
3,977,112 - HP15_3756 0.40 -0.7
3,977,122 + HP15_3756 0.40 +1.5
3,977,150 + HP15_3756 0.42 -1.5
3,977,218 + HP15_3756 0.45 +0.7
3,977,315 - HP15_3756 0.50 +1.8
3,977,317 + HP15_3756 0.50 +0.6
3,977,434 + HP15_3756 0.56 -0.4
3,977,505 - HP15_3756 0.59 +2.9
3,977,513 - HP15_3756 0.60 +1.3
3,977,523 - HP15_3756 0.60 +0.2
3,977,550 + HP15_3756 0.61 -0.0
3,977,568 - HP15_3756 0.62 +1.5
3,977,573 - HP15_3756 0.63 +0.1
3,977,587 + HP15_3756 0.63 +1.8
3,977,631 - HP15_3756 0.65 -2.2
3,977,711 + HP15_3756 0.69 -0.2
3,977,711 + HP15_3756 0.69 -0.5
3,977,824 + HP15_3756 0.75 +0.5
3,977,922 + HP15_3756 0.80 +0.6
3,977,925 - HP15_3756 0.80 +0.6
3,977,968 + HP15_3756 0.82 +1.7
3,977,976 - HP15_3756 0.82 +0.5
3,977,978 + HP15_3756 0.82 +1.4
3,978,076 + HP15_3756 0.87 -1.0
3,978,126 + HP15_3756 0.90 +1.9
3,978,144 - -0.8
3,978,154 + -0.0
3,978,237 + +0.2
3,978,403 + -0.1
3,978,457 - HP15_3757 0.26 -0.5
3,978,462 - HP15_3757 0.28 -0.5
3,978,464 + HP15_3757 0.29 -0.5
3,978,464 + HP15_3757 0.29 -0.3
3,978,472 - HP15_3757 0.32 +1.8
3,978,472 - HP15_3757 0.32 +0.4
3,978,472 - HP15_3757 0.32 +1.6
3,978,554 - HP15_3757 0.65 +0.3
3,978,596 + HP15_3757 0.83 -1.2
3,978,597 + HP15_3757 0.83 +1.1
3,978,603 - HP15_3757 0.85 +1.8
3,978,603 - HP15_3757 0.85 +2.5
3,978,608 - HP15_3757 0.87 -0.7
3,978,623 + +0.4
3,978,631 - +1.4
3,978,662 + -1.5
3,978,689 + +0.8
3,978,689 + +0.8
3,978,816 + HP15_3758 0.24 +1.6
3,978,917 + HP15_3758 0.46 +2.0
3,978,925 - HP15_3758 0.48 -0.4
3,978,948 + HP15_3758 0.52 +1.3
3,979,043 + HP15_3758 0.73 +0.9
3,979,043 + HP15_3758 0.73 -0.0
3,979,051 - HP15_3758 0.75 +0.6
3,979,066 - HP15_3758 0.78 +0.6
3,979,182 + -0.5
3,979,190 - -0.5
3,979,190 - -0.4
3,979,250 - -0.8

Or see this region's nucleotide sequence