Experiment: L-Citrulline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3755 and HP15_3756 overlap by 4 nucleotides HP15_3756 and HP15_3757 are separated by 55 nucleotides HP15_3757 and HP15_3758 are separated by 65 nucleotides
HP15_3755: HP15_3755 - sulfatase, at 3,974,748 to 3,976,298
_3755
HP15_3756: HP15_3756 - glucosyltransferase MdoH, at 3,976,295 to 3,978,337
_3756
HP15_3757: HP15_3757 - hypothetical protein, at 3,978,393 to 3,978,638
_3757
HP15_3758: HP15_3758 - transferase hexapeptide repeat protein, at 3,978,704 to 3,979,168
_3758
Position (kb)
3976
3977
3978
3979 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3975.314 kb on - strand, within HP15_3755 at 3975.358 kb on + strand, within HP15_3755 at 3975.366 kb on - strand, within HP15_3755 at 3975.366 kb on - strand, within HP15_3755 at 3975.371 kb on - strand, within HP15_3755 at 3975.371 kb on - strand, within HP15_3755 at 3975.394 kb on + strand, within HP15_3755 at 3975.396 kb on + strand, within HP15_3755 at 3975.396 kb on + strand, within HP15_3755 at 3975.396 kb on + strand, within HP15_3755 at 3975.401 kb on + strand, within HP15_3755 at 3975.404 kb on - strand, within HP15_3755 at 3975.409 kb on - strand, within HP15_3755 at 3975.441 kb on - strand, within HP15_3755 at 3975.444 kb on + strand, within HP15_3755 at 3975.511 kb on + strand, within HP15_3755 at 3975.511 kb on + strand, within HP15_3755 at 3975.511 kb on + strand, within HP15_3755 at 3975.511 kb on + strand, within HP15_3755 at 3975.511 kb on + strand, within HP15_3755 at 3975.519 kb on - strand, within HP15_3755 at 3975.519 kb on - strand, within HP15_3755 at 3975.575 kb on + strand, within HP15_3755 at 3975.810 kb on + strand, within HP15_3755 at 3975.836 kb on - strand, within HP15_3755 at 3975.871 kb on + strand, within HP15_3755 at 3975.885 kb on + strand, within HP15_3755 at 3975.942 kb on + strand, within HP15_3755 at 3975.947 kb on + strand, within HP15_3755 at 3975.950 kb on - strand, within HP15_3755 at 3975.995 kb on - strand, within HP15_3755 at 3976.005 kb on - strand, within HP15_3755 at 3976.005 kb on - strand, within HP15_3755 at 3976.012 kb on - strand, within HP15_3755 at 3976.012 kb on - strand, within HP15_3755 at 3976.012 kb on - strand, within HP15_3755 at 3976.059 kb on + strand, within HP15_3755 at 3976.072 kb on - strand, within HP15_3755 at 3976.166 kb on + strand at 3976.257 kb on - strand at 3976.290 kb on - strand at 3976.305 kb on + strand at 3976.306 kb on + strand at 3976.313 kb on - strand at 3976.324 kb on + strand at 3976.449 kb on + strand at 3976.457 kb on + strand at 3976.494 kb on + strand at 3976.607 kb on + strand, within HP15_3756 at 3976.607 kb on + strand, within HP15_3756 at 3976.621 kb on + strand, within HP15_3756 at 3976.621 kb on + strand, within HP15_3756 at 3976.631 kb on + strand, within HP15_3756 at 3976.639 kb on - strand, within HP15_3756 at 3976.645 kb on + strand, within HP15_3756 at 3976.655 kb on + strand, within HP15_3756 at 3976.655 kb on + strand, within HP15_3756 at 3976.655 kb on + strand, within HP15_3756 at 3976.656 kb on + strand, within HP15_3756 at 3976.656 kb on + strand, within HP15_3756 at 3976.663 kb on - strand, within HP15_3756 at 3976.663 kb on - strand, within HP15_3756 at 3976.721 kb on + strand, within HP15_3756 at 3976.760 kb on - strand, within HP15_3756 at 3976.765 kb on - strand, within HP15_3756 at 3976.765 kb on - strand, within HP15_3756 at 3976.765 kb on - strand, within HP15_3756 at 3976.885 kb on + strand, within HP15_3756 at 3976.924 kb on - strand, within HP15_3756 at 3976.929 kb on - strand, within HP15_3756 at 3976.929 kb on - strand, within HP15_3756 at 3976.963 kb on + strand, within HP15_3756 at 3976.971 kb on + strand, within HP15_3756 at 3977.000 kb on + strand, within HP15_3756 at 3977.040 kb on + strand, within HP15_3756 at 3977.048 kb on - strand, within HP15_3756 at 3977.048 kb on - strand, within HP15_3756 at 3977.067 kb on - strand, within HP15_3756 at 3977.104 kb on + strand, within HP15_3756 at 3977.104 kb on + strand, within HP15_3756 at 3977.112 kb on - strand, within HP15_3756 at 3977.122 kb on + strand, within HP15_3756 at 3977.150 kb on + strand, within HP15_3756 at 3977.218 kb on + strand, within HP15_3756 at 3977.315 kb on - strand, within HP15_3756 at 3977.317 kb on + strand, within HP15_3756 at 3977.434 kb on + strand, within HP15_3756 at 3977.505 kb on - strand, within HP15_3756 at 3977.513 kb on - strand, within HP15_3756 at 3977.523 kb on - strand, within HP15_3756 at 3977.550 kb on + strand, within HP15_3756 at 3977.568 kb on - strand, within HP15_3756 at 3977.573 kb on - strand, within HP15_3756 at 3977.587 kb on + strand, within HP15_3756 at 3977.631 kb on - strand, within HP15_3756 at 3977.711 kb on + strand, within HP15_3756 at 3977.711 kb on + strand, within HP15_3756 at 3977.824 kb on + strand, within HP15_3756 at 3977.922 kb on + strand, within HP15_3756 at 3977.925 kb on - strand, within HP15_3756 at 3977.968 kb on + strand, within HP15_3756 at 3977.976 kb on - strand, within HP15_3756 at 3977.978 kb on + strand, within HP15_3756 at 3978.076 kb on + strand, within HP15_3756 at 3978.126 kb on + strand, within HP15_3756 at 3978.144 kb on - strand at 3978.154 kb on + strand at 3978.237 kb on + strand at 3978.403 kb on + strand at 3978.457 kb on - strand, within HP15_3757 at 3978.462 kb on - strand, within HP15_3757 at 3978.464 kb on + strand, within HP15_3757 at 3978.464 kb on + strand, within HP15_3757 at 3978.472 kb on - strand, within HP15_3757 at 3978.472 kb on - strand, within HP15_3757 at 3978.472 kb on - strand, within HP15_3757 at 3978.554 kb on - strand, within HP15_3757 at 3978.596 kb on + strand, within HP15_3757 at 3978.597 kb on + strand, within HP15_3757 at 3978.603 kb on - strand, within HP15_3757 at 3978.603 kb on - strand, within HP15_3757 at 3978.608 kb on - strand, within HP15_3757 at 3978.623 kb on + strand at 3978.631 kb on - strand at 3978.662 kb on + strand at 3978.689 kb on + strand at 3978.689 kb on + strand at 3978.816 kb on + strand, within HP15_3758 at 3978.917 kb on + strand, within HP15_3758 at 3978.925 kb on - strand, within HP15_3758 at 3978.948 kb on + strand, within HP15_3758 at 3979.043 kb on + strand, within HP15_3758 at 3979.043 kb on + strand, within HP15_3758 at 3979.051 kb on - strand, within HP15_3758 at 3979.066 kb on - strand, within HP15_3758 at 3979.182 kb on + strand at 3979.190 kb on - strand at 3979.190 kb on - strand at 3979.250 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline as (N) remove 3,975,314 - HP15_3755 0.36 -0.8 3,975,358 + HP15_3755 0.39 +0.0 3,975,366 - HP15_3755 0.40 -0.5 3,975,366 - HP15_3755 0.40 +0.2 3,975,371 - HP15_3755 0.40 +0.0 3,975,371 - HP15_3755 0.40 +1.7 3,975,394 + HP15_3755 0.42 -0.7 3,975,396 + HP15_3755 0.42 -0.2 3,975,396 + HP15_3755 0.42 -0.4 3,975,396 + HP15_3755 0.42 -0.0 3,975,401 + HP15_3755 0.42 +0.3 3,975,404 - HP15_3755 0.42 +2.3 3,975,409 - HP15_3755 0.43 +1.7 3,975,441 - HP15_3755 0.45 -0.1 3,975,444 + HP15_3755 0.45 -0.4 3,975,511 + HP15_3755 0.49 +1.6 3,975,511 + HP15_3755 0.49 +0.9 3,975,511 + HP15_3755 0.49 -0.2 3,975,511 + HP15_3755 0.49 +2.2 3,975,511 + HP15_3755 0.49 -0.5 3,975,519 - HP15_3755 0.50 +0.6 3,975,519 - HP15_3755 0.50 -0.9 3,975,575 + HP15_3755 0.53 +0.3 3,975,810 + HP15_3755 0.68 +1.7 3,975,836 - HP15_3755 0.70 +0.9 3,975,871 + HP15_3755 0.72 -0.3 3,975,885 + HP15_3755 0.73 -0.7 3,975,942 + HP15_3755 0.77 +1.6 3,975,947 + HP15_3755 0.77 +2.4 3,975,950 - HP15_3755 0.77 +1.4 3,975,995 - HP15_3755 0.80 -1.1 3,976,005 - HP15_3755 0.81 -1.4 3,976,005 - HP15_3755 0.81 -0.2 3,976,012 - HP15_3755 0.81 -0.1 3,976,012 - HP15_3755 0.81 -0.2 3,976,012 - HP15_3755 0.81 +0.8 3,976,059 + HP15_3755 0.85 -0.9 3,976,072 - HP15_3755 0.85 -0.7 3,976,166 + -0.4 3,976,257 - -1.8 3,976,290 - -1.1 3,976,305 + -0.9 3,976,306 + +1.0 3,976,313 - +1.6 3,976,324 + -0.1 3,976,449 + +1.3 3,976,457 + -0.4 3,976,494 + +0.6 3,976,607 + HP15_3756 0.15 -0.2 3,976,607 + HP15_3756 0.15 -1.0 3,976,621 + HP15_3756 0.16 +0.1 3,976,621 + HP15_3756 0.16 +1.1 3,976,631 + HP15_3756 0.16 +0.5 3,976,639 - HP15_3756 0.17 +1.6 3,976,645 + HP15_3756 0.17 -0.5 3,976,655 + HP15_3756 0.18 +1.0 3,976,655 + HP15_3756 0.18 -0.7 3,976,655 + HP15_3756 0.18 -0.6 3,976,656 + HP15_3756 0.18 +3.8 3,976,656 + HP15_3756 0.18 +0.4 3,976,663 - HP15_3756 0.18 +1.2 3,976,663 - HP15_3756 0.18 +0.0 3,976,721 + HP15_3756 0.21 +2.1 3,976,760 - HP15_3756 0.23 +1.0 3,976,765 - HP15_3756 0.23 +1.1 3,976,765 - HP15_3756 0.23 +0.2 3,976,765 - HP15_3756 0.23 +0.4 3,976,885 + HP15_3756 0.29 -0.2 3,976,924 - HP15_3756 0.31 +1.8 3,976,929 - HP15_3756 0.31 +2.6 3,976,929 - HP15_3756 0.31 -2.1 3,976,963 + HP15_3756 0.33 -0.1 3,976,971 + HP15_3756 0.33 +1.3 3,977,000 + HP15_3756 0.35 +0.4 3,977,040 + HP15_3756 0.36 -0.7 3,977,048 - HP15_3756 0.37 -0.3 3,977,048 - HP15_3756 0.37 -0.7 3,977,067 - HP15_3756 0.38 +0.4 3,977,104 + HP15_3756 0.40 +1.0 3,977,104 + HP15_3756 0.40 +1.6 3,977,112 - HP15_3756 0.40 -0.7 3,977,122 + HP15_3756 0.40 +1.5 3,977,150 + HP15_3756 0.42 -1.5 3,977,218 + HP15_3756 0.45 +0.7 3,977,315 - HP15_3756 0.50 +1.8 3,977,317 + HP15_3756 0.50 +0.6 3,977,434 + HP15_3756 0.56 -0.4 3,977,505 - HP15_3756 0.59 +2.9 3,977,513 - HP15_3756 0.60 +1.3 3,977,523 - HP15_3756 0.60 +0.2 3,977,550 + HP15_3756 0.61 -0.0 3,977,568 - HP15_3756 0.62 +1.5 3,977,573 - HP15_3756 0.63 +0.1 3,977,587 + HP15_3756 0.63 +1.8 3,977,631 - HP15_3756 0.65 -2.2 3,977,711 + HP15_3756 0.69 -0.2 3,977,711 + HP15_3756 0.69 -0.5 3,977,824 + HP15_3756 0.75 +0.5 3,977,922 + HP15_3756 0.80 +0.6 3,977,925 - HP15_3756 0.80 +0.6 3,977,968 + HP15_3756 0.82 +1.7 3,977,976 - HP15_3756 0.82 +0.5 3,977,978 + HP15_3756 0.82 +1.4 3,978,076 + HP15_3756 0.87 -1.0 3,978,126 + HP15_3756 0.90 +1.9 3,978,144 - -0.8 3,978,154 + -0.0 3,978,237 + +0.2 3,978,403 + -0.1 3,978,457 - HP15_3757 0.26 -0.5 3,978,462 - HP15_3757 0.28 -0.5 3,978,464 + HP15_3757 0.29 -0.5 3,978,464 + HP15_3757 0.29 -0.3 3,978,472 - HP15_3757 0.32 +1.8 3,978,472 - HP15_3757 0.32 +0.4 3,978,472 - HP15_3757 0.32 +1.6 3,978,554 - HP15_3757 0.65 +0.3 3,978,596 + HP15_3757 0.83 -1.2 3,978,597 + HP15_3757 0.83 +1.1 3,978,603 - HP15_3757 0.85 +1.8 3,978,603 - HP15_3757 0.85 +2.5 3,978,608 - HP15_3757 0.87 -0.7 3,978,623 + +0.4 3,978,631 - +1.4 3,978,662 + -1.5 3,978,689 + +0.8 3,978,689 + +0.8 3,978,816 + HP15_3758 0.24 +1.6 3,978,917 + HP15_3758 0.46 +2.0 3,978,925 - HP15_3758 0.48 -0.4 3,978,948 + HP15_3758 0.52 +1.3 3,979,043 + HP15_3758 0.73 +0.9 3,979,043 + HP15_3758 0.73 -0.0 3,979,051 - HP15_3758 0.75 +0.6 3,979,066 - HP15_3758 0.78 +0.6 3,979,182 + -0.5 3,979,190 - -0.5 3,979,190 - -0.4 3,979,250 - -0.8
Or see this region's nucleotide sequence