Strain Fitness in Marinobacter adhaerens HP15 around HP15_3606

Experiment: L-Citrulline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3605 and HP15_3606 are separated by 235 nucleotidesHP15_3606 and HP15_3607 are separated by 184 nucleotides HP15_3605: HP15_3605 - conserved hypothetical protein, at 3,800,136 to 3,801,955 _3605 HP15_3606: HP15_3606 - abortive infection protein-like protein, at 3,802,191 to 3,802,613 _3606 HP15_3607: HP15_3607 - DEAD/DEAH box helicase domain protein, at 3,802,798 to 3,804,120 _3607 Position (kb) 3802 3803Strain fitness (log2 ratio) -2 -1 0 1 2at 3801.206 kb on + strand, within HP15_3605at 3801.243 kb on - strand, within HP15_3605at 3801.319 kb on + strand, within HP15_3605at 3801.326 kb on - strand, within HP15_3605at 3801.412 kb on - strand, within HP15_3605at 3801.450 kb on - strand, within HP15_3605at 3801.541 kb on + strand, within HP15_3605at 3801.541 kb on + strand, within HP15_3605at 3801.549 kb on - strand, within HP15_3605at 3801.549 kb on - strand, within HP15_3605at 3801.608 kb on - strand, within HP15_3605at 3801.661 kb on - strand, within HP15_3605at 3801.780 kb on + strandat 3801.798 kb on - strandat 3801.858 kb on + strandat 3801.909 kb on + strandat 3801.966 kb on - strandat 3801.971 kb on - strandat 3802.085 kb on - strandat 3802.214 kb on - strandat 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.262 kb on + strand, within HP15_3606at 3802.265 kb on - strand, within HP15_3606at 3802.265 kb on - strand, within HP15_3606at 3802.392 kb on + strand, within HP15_3606at 3802.418 kb on - strand, within HP15_3606at 3802.435 kb on + strand, within HP15_3606at 3802.443 kb on - strand, within HP15_3606at 3802.490 kb on + strand, within HP15_3606at 3802.609 kb on + strandat 3802.617 kb on - strandat 3802.629 kb on + strandat 3802.629 kb on + strandat 3802.637 kb on - strandat 3802.802 kb on - strandat 3802.805 kb on + strandat 3802.833 kb on + strandat 3802.961 kb on + strand, within HP15_3607at 3802.961 kb on + strand, within HP15_3607at 3802.964 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.998 kb on + strand, within HP15_3607at 3802.998 kb on + strand, within HP15_3607at 3803.006 kb on - strand, within HP15_3607at 3803.078 kb on + strand, within HP15_3607at 3803.164 kb on - strand, within HP15_3607at 3803.164 kb on - strand, within HP15_3607at 3803.166 kb on + strand, within HP15_3607at 3803.174 kb on - strand, within HP15_3607at 3803.242 kb on + strand, within HP15_3607at 3803.250 kb on - strand, within HP15_3607at 3803.285 kb on + strand, within HP15_3607at 3803.293 kb on - strand, within HP15_3607at 3803.313 kb on - strand, within HP15_3607at 3803.399 kb on - strand, within HP15_3607at 3803.432 kb on + strand, within HP15_3607at 3803.511 kb on + strand, within HP15_3607at 3803.531 kb on + strand, within HP15_3607

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline as (N)
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3,801,206 + HP15_3605 0.59 -0.5
3,801,243 - HP15_3605 0.61 -0.6
3,801,319 + HP15_3605 0.65 -0.2
3,801,326 - HP15_3605 0.65 -0.3
3,801,412 - HP15_3605 0.70 -1.4
3,801,450 - HP15_3605 0.72 -0.5
3,801,541 + HP15_3605 0.77 +1.5
3,801,541 + HP15_3605 0.77 -0.7
3,801,549 - HP15_3605 0.78 +2.7
3,801,549 - HP15_3605 0.78 +0.4
3,801,608 - HP15_3605 0.81 +0.8
3,801,661 - HP15_3605 0.84 -1.0
3,801,780 + +0.1
3,801,798 - +1.6
3,801,858 + -0.4
3,801,909 + +0.3
3,801,966 - +0.3
3,801,971 - -0.0
3,802,085 - -0.0
3,802,214 - -1.0
3,802,257 + HP15_3606 0.16 -1.1
3,802,257 + HP15_3606 0.16 +1.4
3,802,257 + HP15_3606 0.16 +1.2
3,802,257 + HP15_3606 0.16 +1.2
3,802,257 + HP15_3606 0.16 +0.0
3,802,257 + HP15_3606 0.16 +1.8
3,802,262 + HP15_3606 0.17 +0.4
3,802,265 - HP15_3606 0.17 +1.5
3,802,265 - HP15_3606 0.17 +1.1
3,802,392 + HP15_3606 0.48 -0.8
3,802,418 - HP15_3606 0.54 +2.7
3,802,435 + HP15_3606 0.58 -0.6
3,802,443 - HP15_3606 0.60 +1.3
3,802,490 + HP15_3606 0.71 +0.2
3,802,609 + -1.0
3,802,617 - +0.7
3,802,629 + +0.3
3,802,629 + -0.4
3,802,637 - +2.2
3,802,802 - -0.8
3,802,805 + +1.5
3,802,833 + +0.3
3,802,961 + HP15_3607 0.12 +0.8
3,802,961 + HP15_3607 0.12 +1.3
3,802,964 - HP15_3607 0.13 +0.8
3,802,969 - HP15_3607 0.13 -0.4
3,802,969 - HP15_3607 0.13 -0.8
3,802,969 - HP15_3607 0.13 +1.0
3,802,998 + HP15_3607 0.15 -0.1
3,802,998 + HP15_3607 0.15 +1.0
3,803,006 - HP15_3607 0.16 -0.3
3,803,078 + HP15_3607 0.21 +1.8
3,803,164 - HP15_3607 0.28 -0.3
3,803,164 - HP15_3607 0.28 -0.9
3,803,166 + HP15_3607 0.28 -1.4
3,803,174 - HP15_3607 0.28 -0.5
3,803,242 + HP15_3607 0.34 +0.7
3,803,250 - HP15_3607 0.34 -1.1
3,803,285 + HP15_3607 0.37 +0.3
3,803,293 - HP15_3607 0.37 +0.7
3,803,313 - HP15_3607 0.39 -0.4
3,803,399 - HP15_3607 0.45 +2.6
3,803,432 + HP15_3607 0.48 -0.4
3,803,511 + HP15_3607 0.54 -0.1
3,803,531 + HP15_3607 0.55 -2.6

Or see this region's nucleotide sequence