Experiment: L-Citrulline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2542 and HP15_2543 are separated by 5 nucleotides HP15_2543 and HP15_2544 are separated by 9 nucleotides HP15_2544 and HP15_2545 are separated by 210 nucleotides
HP15_2542: HP15_2542 - methylcrotonoyl-coenzyme A carboxylase 1 (alpha), at 2,686,950 to 2,688,920
_2542
HP15_2543: HP15_2543 - short-chain dehydrogenase/reductase SDR, at 2,688,926 to 2,689,744
_2543
HP15_2544: HP15_2544 - acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 2,689,754 to 2,691,635
_2544
HP15_2545: HP15_2545 - oxidoreductase, zinc-binding dehydrogenase family protein, at 2,691,846 to 2,692,826
_2545
Position (kb)
2689
2690
2691
2692 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2688.799 kb on + strand at 2688.802 kb on - strand at 2688.905 kb on + strand at 2689.155 kb on + strand, within HP15_2543 at 2689.196 kb on + strand, within HP15_2543 at 2689.204 kb on - strand, within HP15_2543 at 2689.240 kb on + strand, within HP15_2543 at 2689.248 kb on - strand, within HP15_2543 at 2689.289 kb on + strand, within HP15_2543 at 2689.289 kb on + strand, within HP15_2543 at 2689.315 kb on + strand, within HP15_2543 at 2689.315 kb on + strand, within HP15_2543 at 2689.318 kb on - strand, within HP15_2543 at 2689.320 kb on + strand, within HP15_2543 at 2689.323 kb on - strand, within HP15_2543 at 2689.394 kb on - strand, within HP15_2543 at 2689.527 kb on + strand, within HP15_2543 at 2689.535 kb on - strand, within HP15_2543 at 2689.552 kb on - strand, within HP15_2543 at 2689.639 kb on - strand, within HP15_2543 at 2689.811 kb on + strand at 2690.061 kb on + strand, within HP15_2544 at 2690.167 kb on + strand, within HP15_2544 at 2690.175 kb on - strand, within HP15_2544 at 2690.175 kb on - strand, within HP15_2544 at 2690.175 kb on - strand, within HP15_2544 at 2690.213 kb on - strand, within HP15_2544 at 2690.296 kb on + strand, within HP15_2544 at 2690.323 kb on + strand, within HP15_2544 at 2690.340 kb on + strand, within HP15_2544 at 2690.359 kb on - strand, within HP15_2544 at 2690.383 kb on + strand, within HP15_2544 at 2690.383 kb on + strand, within HP15_2544 at 2690.383 kb on + strand, within HP15_2544 at 2690.414 kb on - strand, within HP15_2544 at 2690.414 kb on - strand, within HP15_2544 at 2690.421 kb on - strand, within HP15_2544 at 2690.447 kb on + strand, within HP15_2544 at 2690.479 kb on + strand, within HP15_2544 at 2690.487 kb on - strand, within HP15_2544 at 2690.534 kb on + strand, within HP15_2544 at 2690.594 kb on - strand, within HP15_2544 at 2690.606 kb on + strand, within HP15_2544 at 2690.611 kb on + strand, within HP15_2544 at 2690.630 kb on - strand, within HP15_2544 at 2690.654 kb on - strand, within HP15_2544 at 2690.756 kb on + strand, within HP15_2544 at 2690.819 kb on - strand, within HP15_2544 at 2690.872 kb on + strand, within HP15_2544 at 2691.025 kb on + strand, within HP15_2544 at 2691.025 kb on + strand, within HP15_2544 at 2691.148 kb on - strand, within HP15_2544 at 2691.160 kb on - strand, within HP15_2544 at 2691.192 kb on + strand, within HP15_2544 at 2691.280 kb on + strand, within HP15_2544 at 2691.288 kb on - strand, within HP15_2544 at 2691.313 kb on - strand, within HP15_2544 at 2691.331 kb on + strand, within HP15_2544 at 2691.363 kb on - strand, within HP15_2544 at 2691.436 kb on - strand, within HP15_2544 at 2691.484 kb on + strand at 2691.554 kb on - strand at 2691.573 kb on + strand at 2691.573 kb on - strand at 2691.574 kb on + strand at 2691.574 kb on + strand at 2691.660 kb on + strand at 2691.660 kb on + strand at 2691.668 kb on - strand at 2691.775 kb on + strand at 2691.814 kb on - strand at 2691.819 kb on + strand at 2691.827 kb on - strand at 2691.845 kb on + strand at 2691.914 kb on - strand at 2691.935 kb on - strand at 2691.935 kb on - strand at 2691.937 kb on + strand at 2691.945 kb on - strand, within HP15_2545 at 2691.945 kb on - strand, within HP15_2545 at 2691.967 kb on + strand, within HP15_2545 at 2691.975 kb on - strand, within HP15_2545 at 2692.204 kb on + strand, within HP15_2545 at 2692.229 kb on - strand, within HP15_2545 at 2692.265 kb on + strand, within HP15_2545 at 2692.344 kb on - strand, within HP15_2545 at 2692.350 kb on - strand, within HP15_2545 at 2692.419 kb on - strand, within HP15_2545 at 2692.430 kb on + strand, within HP15_2545 at 2692.430 kb on + strand, within HP15_2545 at 2692.430 kb on + strand, within HP15_2545 at 2692.430 kb on + strand, within HP15_2545 at 2692.438 kb on - strand, within HP15_2545 at 2692.438 kb on - strand, within HP15_2545 at 2692.472 kb on - strand, within HP15_2545 at 2692.558 kb on + strand, within HP15_2545
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline as (N) remove 2,688,799 + -2.2 2,688,802 - +2.2 2,688,905 + -1.8 2,689,155 + HP15_2543 0.28 -0.5 2,689,196 + HP15_2543 0.33 +0.2 2,689,204 - HP15_2543 0.34 -0.3 2,689,240 + HP15_2543 0.38 -0.3 2,689,248 - HP15_2543 0.39 +1.3 2,689,289 + HP15_2543 0.44 -1.4 2,689,289 + HP15_2543 0.44 -1.1 2,689,315 + HP15_2543 0.47 -0.9 2,689,315 + HP15_2543 0.47 +0.1 2,689,318 - HP15_2543 0.48 +0.0 2,689,320 + HP15_2543 0.48 +0.4 2,689,323 - HP15_2543 0.48 -0.7 2,689,394 - HP15_2543 0.57 -0.9 2,689,527 + HP15_2543 0.73 +1.6 2,689,535 - HP15_2543 0.74 -0.0 2,689,552 - HP15_2543 0.76 +2.7 2,689,639 - HP15_2543 0.87 -2.3 2,689,811 + +0.1 2,690,061 + HP15_2544 0.16 -0.8 2,690,167 + HP15_2544 0.22 +1.5 2,690,175 - HP15_2544 0.22 +1.7 2,690,175 - HP15_2544 0.22 +1.0 2,690,175 - HP15_2544 0.22 +0.8 2,690,213 - HP15_2544 0.24 +2.1 2,690,296 + HP15_2544 0.29 -0.3 2,690,323 + HP15_2544 0.30 +1.5 2,690,340 + HP15_2544 0.31 -0.4 2,690,359 - HP15_2544 0.32 -0.0 2,690,383 + HP15_2544 0.33 -0.9 2,690,383 + HP15_2544 0.33 +1.3 2,690,383 + HP15_2544 0.33 +0.8 2,690,414 - HP15_2544 0.35 +0.0 2,690,414 - HP15_2544 0.35 -0.5 2,690,421 - HP15_2544 0.35 -0.3 2,690,447 + HP15_2544 0.37 -0.2 2,690,479 + HP15_2544 0.39 +0.7 2,690,487 - HP15_2544 0.39 +1.8 2,690,534 + HP15_2544 0.41 +0.0 2,690,594 - HP15_2544 0.45 +1.8 2,690,606 + HP15_2544 0.45 -0.6 2,690,611 + HP15_2544 0.46 +1.0 2,690,630 - HP15_2544 0.47 -0.5 2,690,654 - HP15_2544 0.48 -0.8 2,690,756 + HP15_2544 0.53 -0.6 2,690,819 - HP15_2544 0.57 -0.9 2,690,872 + HP15_2544 0.59 +2.2 2,691,025 + HP15_2544 0.68 +0.6 2,691,025 + HP15_2544 0.68 -0.6 2,691,148 - HP15_2544 0.74 +3.1 2,691,160 - HP15_2544 0.75 -0.6 2,691,192 + HP15_2544 0.76 +1.8 2,691,280 + HP15_2544 0.81 +1.5 2,691,288 - HP15_2544 0.82 +1.1 2,691,313 - HP15_2544 0.83 +0.1 2,691,331 + HP15_2544 0.84 +0.1 2,691,363 - HP15_2544 0.85 -2.0 2,691,436 - HP15_2544 0.89 +1.2 2,691,484 + +0.0 2,691,554 - +1.5 2,691,573 + +2.0 2,691,573 - +0.2 2,691,574 + -0.7 2,691,574 + -0.2 2,691,660 + +1.8 2,691,660 + -0.4 2,691,668 - -0.8 2,691,775 + -1.3 2,691,814 - +0.1 2,691,819 + -1.9 2,691,827 - -0.6 2,691,845 + -0.7 2,691,914 - +1.4 2,691,935 - -0.5 2,691,935 - +0.2 2,691,937 + -0.2 2,691,945 - HP15_2545 0.10 +1.6 2,691,945 - HP15_2545 0.10 +1.3 2,691,967 + HP15_2545 0.12 -0.7 2,691,975 - HP15_2545 0.13 +1.8 2,692,204 + HP15_2545 0.36 +2.0 2,692,229 - HP15_2545 0.39 -0.5 2,692,265 + HP15_2545 0.43 -0.9 2,692,344 - HP15_2545 0.51 +0.0 2,692,350 - HP15_2545 0.51 +1.1 2,692,419 - HP15_2545 0.58 -0.5 2,692,430 + HP15_2545 0.60 -0.6 2,692,430 + HP15_2545 0.60 +0.1 2,692,430 + HP15_2545 0.60 -0.7 2,692,430 + HP15_2545 0.60 +0.9 2,692,438 - HP15_2545 0.60 +1.4 2,692,438 - HP15_2545 0.60 -1.0 2,692,472 - HP15_2545 0.64 -0.4 2,692,558 + HP15_2545 0.73 +1.8
Or see this region's nucleotide sequence