Experiment: L-Citrulline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2468 and HP15_2469 overlap by 23 nucleotides HP15_2469 and HP15_2470 overlap by 4 nucleotides HP15_2470 and HP15_2471 overlap by 11 nucleotides HP15_2471 and HP15_2472 are separated by 13 nucleotides HP15_2472 and HP15_2473 are separated by 845 nucleotides
HP15_2468: HP15_2468 - metalloprotease YbeY, at 2,608,711 to 2,609,058
_2468
HP15_2469: HP15_2469 - predicted metal-dependent hydrolase, at 2,609,036 to 2,609,170
_2469
HP15_2470: HP15_2470 - metal ion transporter, at 2,609,167 to 2,610,012
_2470
HP15_2471: HP15_2471 - apolipoprotein N-acyltransferase, at 2,610,002 to 2,611,564
_2471
HP15_2472: HP15_2472 - hypothetical protein, at 2,611,578 to 2,611,685
_2472
HP15_2473: HP15_2473 - leucyl-tRNA synthetase, at 2,612,531 to 2,615,116
_2473
Position (kb)
2610
2611
2612 Strain fitness (log2 ratio)
-2
-1
0
1 at 2609.119 kb on + strand, within HP15_2469 at 2609.156 kb on + strand, within HP15_2469 at 2609.449 kb on + strand, within HP15_2470 at 2609.685 kb on - strand, within HP15_2470 at 2609.706 kb on - strand, within HP15_2470 at 2609.726 kb on - strand, within HP15_2470 at 2611.609 kb on - strand, within HP15_2472 at 2611.619 kb on + strand, within HP15_2472 at 2611.692 kb on - strand at 2611.697 kb on - strand at 2612.060 kb on + strand at 2612.147 kb on + strand at 2612.194 kb on - strand at 2612.280 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline as (N) remove 2,609,119 + HP15_2469 0.61 +0.6 2,609,156 + HP15_2469 0.89 +0.2 2,609,449 + HP15_2470 0.33 -1.9 2,609,685 - HP15_2470 0.61 -0.2 2,609,706 - HP15_2470 0.64 -1.8 2,609,726 - HP15_2470 0.66 -0.9 2,611,609 - HP15_2472 0.29 +1.5 2,611,619 + HP15_2472 0.38 +1.5 2,611,692 - -1.3 2,611,697 - +1.1 2,612,060 + +0.4 2,612,147 + -0.8 2,612,194 - -0.4 2,612,280 - -0.3
Or see this region's nucleotide sequence