Experiment: L-Citrulline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2105 and HP15_2106 are separated by 9 nucleotides HP15_2106 and HP15_2107 are separated by 220 nucleotides
HP15_2105: HP15_2105 - response regulator receiver domain protein (CheY-), at 2,204,000 to 2,205,841
_2105
HP15_2106: HP15_2106 - conserved hypothetical protein, at 2,205,851 to 2,206,492
_2106
HP15_2107: HP15_2107 - cytochrome c oxidase, cbb3-type, subunit I, at 2,206,713 to 2,208,143
_2107
Position (kb)
2205
2206
2207 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2204.893 kb on - strand, within HP15_2105 at 2204.916 kb on + strand, within HP15_2105 at 2204.984 kb on - strand, within HP15_2105 at 2205.011 kb on + strand, within HP15_2105 at 2205.076 kb on + strand, within HP15_2105 at 2205.084 kb on - strand, within HP15_2105 at 2205.084 kb on - strand, within HP15_2105 at 2205.112 kb on - strand, within HP15_2105 at 2205.141 kb on - strand, within HP15_2105 at 2205.152 kb on + strand, within HP15_2105 at 2205.182 kb on + strand, within HP15_2105 at 2205.211 kb on + strand, within HP15_2105 at 2205.321 kb on - strand, within HP15_2105 at 2205.407 kb on + strand, within HP15_2105 at 2205.432 kb on + strand, within HP15_2105 at 2205.440 kb on - strand, within HP15_2105 at 2205.440 kb on - strand, within HP15_2105 at 2205.450 kb on - strand, within HP15_2105 at 2205.482 kb on + strand, within HP15_2105 at 2205.512 kb on - strand, within HP15_2105 at 2205.514 kb on - strand, within HP15_2105 at 2205.675 kb on + strand at 2205.683 kb on - strand at 2205.748 kb on - strand at 2205.773 kb on + strand at 2205.773 kb on + strand at 2205.781 kb on - strand at 2205.781 kb on - strand at 2205.781 kb on - strand at 2205.825 kb on - strand at 2205.825 kb on - strand at 2205.846 kb on - strand at 2205.880 kb on - strand at 2206.059 kb on + strand, within HP15_2106 at 2206.208 kb on + strand, within HP15_2106 at 2206.210 kb on + strand, within HP15_2106 at 2206.243 kb on - strand, within HP15_2106 at 2206.530 kb on - strand at 2206.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline as (N) remove 2,204,893 - HP15_2105 0.48 +1.9 2,204,916 + HP15_2105 0.50 -0.5 2,204,984 - HP15_2105 0.53 +0.3 2,205,011 + HP15_2105 0.55 -0.3 2,205,076 + HP15_2105 0.58 +0.5 2,205,084 - HP15_2105 0.59 +1.5 2,205,084 - HP15_2105 0.59 -0.4 2,205,112 - HP15_2105 0.60 +0.1 2,205,141 - HP15_2105 0.62 -2.5 2,205,152 + HP15_2105 0.63 +0.1 2,205,182 + HP15_2105 0.64 -0.4 2,205,211 + HP15_2105 0.66 -0.0 2,205,321 - HP15_2105 0.72 +1.9 2,205,407 + HP15_2105 0.76 -0.4 2,205,432 + HP15_2105 0.78 +0.2 2,205,440 - HP15_2105 0.78 -1.2 2,205,440 - HP15_2105 0.78 +0.0 2,205,450 - HP15_2105 0.79 -0.4 2,205,482 + HP15_2105 0.80 -0.1 2,205,512 - HP15_2105 0.82 -0.4 2,205,514 - HP15_2105 0.82 +2.0 2,205,675 + -1.2 2,205,683 - +0.8 2,205,748 - +1.4 2,205,773 + -1.3 2,205,773 + -0.9 2,205,781 - +1.3 2,205,781 - -0.8 2,205,781 - +0.1 2,205,825 - +1.0 2,205,825 - +0.6 2,205,846 - +1.9 2,205,880 - -0.8 2,206,059 + HP15_2106 0.32 +1.2 2,206,208 + HP15_2106 0.56 +0.0 2,206,210 + HP15_2106 0.56 +2.4 2,206,243 - HP15_2106 0.61 +1.5 2,206,530 - +2.2 2,206,634 - +1.6
Or see this region's nucleotide sequence