Strain Fitness in Marinobacter adhaerens HP15 around HP15_1693

Experiment: L-Citrulline as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1692 and HP15_1693 are separated by 48 nucleotidesHP15_1693 and HP15_1694 are separated by 262 nucleotides HP15_1692: HP15_1692 - luciferase family protein, at 1,781,900 to 1,782,868 _1692 HP15_1693: HP15_1693 - conserved hypothetical protein, at 1,782,917 to 1,783,720 _1693 HP15_1694: HP15_1694 - conserved hypothetical protein, at 1,783,983 to 1,785,311 _1694 Position (kb) 1782 1783 1784Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1782.029 kb on + strand, within HP15_1692at 1782.138 kb on + strand, within HP15_1692at 1782.224 kb on + strand, within HP15_1692at 1782.232 kb on - strand, within HP15_1692at 1782.252 kb on + strand, within HP15_1692at 1782.262 kb on + strand, within HP15_1692at 1782.275 kb on - strand, within HP15_1692at 1782.344 kb on - strand, within HP15_1692at 1782.369 kb on + strand, within HP15_1692at 1782.397 kb on - strand, within HP15_1692at 1782.514 kb on + strand, within HP15_1692at 1782.534 kb on + strand, within HP15_1692at 1782.534 kb on + strand, within HP15_1692at 1782.706 kb on - strand, within HP15_1692at 1782.770 kb on - strand, within HP15_1692at 1782.885 kb on + strandat 1782.893 kb on - strandat 1782.898 kb on - strandat 1782.951 kb on - strandat 1783.052 kb on - strand, within HP15_1693at 1783.249 kb on - strand, within HP15_1693at 1783.303 kb on - strand, within HP15_1693at 1783.328 kb on - strand, within HP15_1693at 1783.555 kb on - strand, within HP15_1693at 1783.645 kb on + strandat 1783.648 kb on - strandat 1783.652 kb on + strandat 1783.659 kb on + strandat 1783.665 kb on - strandat 1783.685 kb on - strandat 1783.723 kb on + strandat 1783.822 kb on + strandat 1783.822 kb on + strandat 1783.822 kb on + strandat 1783.859 kb on - strandat 1783.859 kb on - strandat 1784.207 kb on + strand, within HP15_1694at 1784.259 kb on + strand, within HP15_1694at 1784.267 kb on - strand, within HP15_1694at 1784.267 kb on - strand, within HP15_1694at 1784.295 kb on + strand, within HP15_1694at 1784.295 kb on + strand, within HP15_1694at 1784.295 kb on + strand, within HP15_1694at 1784.303 kb on - strand, within HP15_1694at 1784.378 kb on - strand, within HP15_1694at 1784.520 kb on + strand, within HP15_1694at 1784.527 kb on - strand, within HP15_1694at 1784.567 kb on + strand, within HP15_1694at 1784.643 kb on + strand, within HP15_1694at 1784.653 kb on + strand, within HP15_1694at 1784.653 kb on + strand, within HP15_1694at 1784.661 kb on - strand, within HP15_1694at 1784.661 kb on - strand, within HP15_1694at 1784.714 kb on - strand, within HP15_1694

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline as (N)
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1,782,029 + HP15_1692 0.13 +1.6
1,782,138 + HP15_1692 0.25 -0.1
1,782,224 + HP15_1692 0.33 -0.5
1,782,232 - HP15_1692 0.34 +1.3
1,782,252 + HP15_1692 0.36 +0.3
1,782,262 + HP15_1692 0.37 +1.5
1,782,275 - HP15_1692 0.39 -1.2
1,782,344 - HP15_1692 0.46 +1.9
1,782,369 + HP15_1692 0.48 +0.4
1,782,397 - HP15_1692 0.51 +0.4
1,782,514 + HP15_1692 0.63 -0.7
1,782,534 + HP15_1692 0.65 +1.3
1,782,534 + HP15_1692 0.65 +1.8
1,782,706 - HP15_1692 0.83 -0.8
1,782,770 - HP15_1692 0.90 +0.5
1,782,885 + +2.5
1,782,893 - -1.0
1,782,898 - -0.9
1,782,951 - -0.5
1,783,052 - HP15_1693 0.17 +0.2
1,783,249 - HP15_1693 0.41 +1.8
1,783,303 - HP15_1693 0.48 -0.1
1,783,328 - HP15_1693 0.51 +1.6
1,783,555 - HP15_1693 0.79 +1.9
1,783,645 + +1.8
1,783,648 - +1.4
1,783,652 + +2.6
1,783,659 + -0.1
1,783,665 - +0.0
1,783,685 - +1.4
1,783,723 + +1.2
1,783,822 + +1.5
1,783,822 + -0.3
1,783,822 + +1.8
1,783,859 - +0.4
1,783,859 - +0.0
1,784,207 + HP15_1694 0.17 +0.0
1,784,259 + HP15_1694 0.21 +0.9
1,784,267 - HP15_1694 0.21 +4.3
1,784,267 - HP15_1694 0.21 -0.4
1,784,295 + HP15_1694 0.23 +0.1
1,784,295 + HP15_1694 0.23 +1.8
1,784,295 + HP15_1694 0.23 +0.8
1,784,303 - HP15_1694 0.24 +0.1
1,784,378 - HP15_1694 0.30 +1.4
1,784,520 + HP15_1694 0.40 +3.2
1,784,527 - HP15_1694 0.41 +1.7
1,784,567 + HP15_1694 0.44 +0.5
1,784,643 + HP15_1694 0.50 -2.2
1,784,653 + HP15_1694 0.50 +1.6
1,784,653 + HP15_1694 0.50 +1.7
1,784,661 - HP15_1694 0.51 -0.1
1,784,661 - HP15_1694 0.51 -0.1
1,784,714 - HP15_1694 0.55 +2.2

Or see this region's nucleotide sequence