Experiment: L-Citrulline as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1630 and HP15_1631 are separated by 9 nucleotides HP15_1631 and HP15_1632 are separated by 5 nucleotides HP15_1632 and HP15_1633 are separated by 26 nucleotides
HP15_1630: HP15_1630 - serine/threonine protein kinase, at 1,728,849 to 1,730,693
_1630
HP15_1631: HP15_1631 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) , at 1,730,703 to 1,731,839
_1631
HP15_1632: HP15_1632 - protein containing biotin/lipoyl attachment domain, at 1,731,845 to 1,732,300
_1632
HP15_1633: HP15_1633 - 2-oxoisovalerate dehydrogenase, E1 component, beta subunit, at 1,732,327 to 1,733,304
_1633
Position (kb)
1730
1731
1732 Strain fitness (log2 ratio)
-1
0
1
2 at 1729.728 kb on - strand, within HP15_1630 at 1729.896 kb on + strand, within HP15_1630 at 1730.045 kb on + strand, within HP15_1630 at 1730.080 kb on + strand, within HP15_1630 at 1730.266 kb on + strand, within HP15_1630 at 1730.404 kb on - strand, within HP15_1630 at 1730.435 kb on - strand, within HP15_1630 at 1730.531 kb on - strand at 1730.582 kb on - strand at 1730.629 kb on - strand at 1730.649 kb on + strand at 1730.718 kb on - strand at 1730.926 kb on + strand, within HP15_1631 at 1730.982 kb on - strand, within HP15_1631 at 1731.078 kb on + strand, within HP15_1631 at 1731.239 kb on + strand, within HP15_1631 at 1731.391 kb on + strand, within HP15_1631 at 1731.399 kb on - strand, within HP15_1631 at 1731.436 kb on + strand, within HP15_1631 at 1731.488 kb on + strand, within HP15_1631 at 1731.602 kb on + strand, within HP15_1631 at 1731.602 kb on + strand, within HP15_1631 at 1731.612 kb on + strand, within HP15_1631 at 1731.770 kb on + strand at 1731.799 kb on + strand at 1732.058 kb on + strand, within HP15_1632 at 1732.293 kb on - strand at 1732.308 kb on + strand at 1732.308 kb on + strand at 1732.308 kb on + strand at 1732.315 kb on + strand at 1732.316 kb on - strand at 1732.323 kb on - strand at 1732.369 kb on - strand at 1732.417 kb on - strand at 1732.549 kb on - strand, within HP15_1633 at 1732.675 kb on + strand, within HP15_1633 at 1732.690 kb on + strand, within HP15_1633 at 1732.744 kb on + strand, within HP15_1633 at 1732.818 kb on - strand, within HP15_1633
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline as (N) remove 1,729,728 - HP15_1630 0.48 +2.0 1,729,896 + HP15_1630 0.57 -0.1 1,730,045 + HP15_1630 0.65 -1.2 1,730,080 + HP15_1630 0.67 +1.8 1,730,266 + HP15_1630 0.77 -0.1 1,730,404 - HP15_1630 0.84 -0.7 1,730,435 - HP15_1630 0.86 +0.4 1,730,531 - -0.2 1,730,582 - +1.4 1,730,629 - +0.0 1,730,649 + +2.3 1,730,718 - +1.3 1,730,926 + HP15_1631 0.20 -0.4 1,730,982 - HP15_1631 0.25 +1.3 1,731,078 + HP15_1631 0.33 -0.4 1,731,239 + HP15_1631 0.47 +1.0 1,731,391 + HP15_1631 0.61 +0.3 1,731,399 - HP15_1631 0.61 +1.4 1,731,436 + HP15_1631 0.64 +1.8 1,731,488 + HP15_1631 0.69 +1.5 1,731,602 + HP15_1631 0.79 +0.1 1,731,602 + HP15_1631 0.79 +1.7 1,731,612 + HP15_1631 0.80 +1.9 1,731,770 + +1.5 1,731,799 + +0.8 1,732,058 + HP15_1632 0.47 +1.0 1,732,293 - -0.2 1,732,308 + -0.9 1,732,308 + +0.1 1,732,308 + +0.1 1,732,315 + -0.7 1,732,316 - -0.7 1,732,323 - +0.7 1,732,369 - -1.0 1,732,417 - +0.5 1,732,549 - HP15_1633 0.23 -1.4 1,732,675 + HP15_1633 0.36 -1.2 1,732,690 + HP15_1633 0.37 +0.2 1,732,744 + HP15_1633 0.43 -0.3 1,732,818 - HP15_1633 0.50 -0.2
Or see this region's nucleotide sequence