Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g113

Experiment: D-Alanine as (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine as (N)
108,093	+				+0.9
108,110	-				+1.3
108,156	-				+0.9
108,209	-				+1.4
108,220	-				-0.7
108,234	+				+1.4
108,295	-				-0.4
108,295	-				+1.0
108,303	+		HP15_p187g112	0.11	+0.4
108,313	+		HP15_p187g112	0.12	+0.4
108,314	+		HP15_p187g112	0.13	+1.1
108,321	-		HP15_p187g112	0.14	-0.8
108,338	-		HP15_p187g112	0.17	-0.4
108,502	+		HP15_p187g112	0.45	+1.7
108,502	+		HP15_p187g112	0.45	+1.6
108,519	+		HP15_p187g112	0.48	-1.1
108,520	-		HP15_p187g112	0.49	+1.4
108,527	-		HP15_p187g112	0.50	-0.4
108,527	-		HP15_p187g112	0.50	+1.1
108,594	+		HP15_p187g112	0.61	+0.2
108,602	-		HP15_p187g112	0.63	+0.2
108,608	+		HP15_p187g112	0.64	-0.3
108,608	+		HP15_p187g112	0.64	-0.6
108,616	-		HP15_p187g112	0.65	+1.6
108,662	-		HP15_p187g112	0.73	+1.8
108,665	+		HP15_p187g112	0.74	+1.7
108,668	-		HP15_p187g112	0.74	-0.2
108,673	-		HP15_p187g112	0.75	+1.9
108,695	+		HP15_p187g112	0.79	+1.5
108,708	+		HP15_p187g112	0.81	+0.0
108,717	+		HP15_p187g112	0.83	-0.2
108,728	+		HP15_p187g112	0.85	+2.0
108,754	+		HP15_p187g112	0.89	+2.1
108,810	-				+0.2
108,810	-				-0.6
108,812	+				+2.0
108,812	+				-0.4
108,812	+				-1.0
108,820	-				+2.0
108,887	-				-1.8
108,952	+				+1.7
108,977	+				+1.8
109,006	-				-0.3
109,020	-				-0.2
109,034	+				-0.3
109,037	-				-0.2
109,037	-				-0.5
109,056	-				+0.4
109,061	-				+2.2
109,090	+				-0.8
109,098	-				+0.8
109,119	-				+0.5
109,123	-				-0.5
109,154	+				+0.4
109,154	-				+1.6
109,154	-				-0.7
109,182	-				-1.4
109,197	-				-0.7
109,197	-				+0.6
109,266	+				-0.6
109,266	-				-0.4
109,290	+		HP15_p187g113	0.11	+1.8
109,298	-		HP15_p187g113	0.11	+1.4
109,298	-		HP15_p187g113	0.11	-0.1
109,308	-		HP15_p187g113	0.12	-1.0
109,309	+		HP15_p187g113	0.12	-0.3
109,309	+		HP15_p187g113	0.12	+1.7
109,319	-		HP15_p187g113	0.12	-0.3
109,341	+		HP15_p187g113	0.13	-0.1
109,349	-		HP15_p187g113	0.13	-0.7
109,349	-		HP15_p187g113	0.13	-1.4
109,378	-		HP15_p187g113	0.15	-0.2
109,380	+		HP15_p187g113	0.15	-0.5
109,380	+		HP15_p187g113	0.15	+0.1
109,380	+		HP15_p187g113	0.15	-1.2
109,383	-		HP15_p187g113	0.15	+1.6
109,388	-		HP15_p187g113	0.15	+1.9
109,388	-		HP15_p187g113	0.15	+1.6
109,388	-		HP15_p187g113	0.15	-1.8
109,398	-		HP15_p187g113	0.16	+0.9
109,437	-		HP15_p187g113	0.18	-0.1
109,458	-		HP15_p187g113	0.19	-0.6
109,458	-		HP15_p187g113	0.19	+1.9
109,507	+		HP15_p187g113	0.21	+0.6
109,512	-		HP15_p187g113	0.21	-0.2
109,519	+		HP15_p187g113	0.22	+2.4
109,519	+		HP15_p187g113	0.22	-0.2
109,618	+		HP15_p187g113	0.26	+0.7
109,633	+		HP15_p187g113	0.27	-0.2
109,703	-		HP15_p187g113	0.30	-0.7
109,758	-		HP15_p187g113	0.33	-1.0
109,787	+		HP15_p187g113	0.34	-0.3
109,818	-		HP15_p187g113	0.36	-0.9
109,827	-		HP15_p187g113	0.36	-0.8
109,858	+		HP15_p187g113	0.38	-1.1
109,858	+		HP15_p187g113	0.38	+0.1
109,866	-		HP15_p187g113	0.38	-0.7
109,885	-		HP15_p187g113	0.39	+1.8
109,890	-		HP15_p187g113	0.39	+0.6
109,890	-		HP15_p187g113	0.39	+0.4
109,895	-		HP15_p187g113	0.40	-0.5
109,969	+		HP15_p187g113	0.43	+1.3
109,969	+		HP15_p187g113	0.43	+0.6
109,973	+		HP15_p187g113	0.43	+0.2
109,997	-		HP15_p187g113	0.45	-1.2
110,020	-		HP15_p187g113	0.46	-0.5
110,038	+		HP15_p187g113	0.47	+2.0
110,041	+		HP15_p187g113	0.47	-0.2
110,041	+		HP15_p187g113	0.47	-0.8
110,041	+		HP15_p187g113	0.47	-0.5
110,041	+		HP15_p187g113	0.47	+1.8
110,041	+		HP15_p187g113	0.47	+0.4
110,041	+		HP15_p187g113	0.47	-0.6
110,046	-		HP15_p187g113	0.47	-1.6
110,053	+		HP15_p187g113	0.47	+1.7
110,053	+		HP15_p187g113	0.47	+1.6
110,058	+		HP15_p187g113	0.47	+0.8
110,066	-		HP15_p187g113	0.48	-0.0
110,071	+		HP15_p187g113	0.48	-1.1
110,079	-		HP15_p187g113	0.48	+0.3
110,201	-		HP15_p187g113	0.54	+0.3
110,228	-		HP15_p187g113	0.56	+0.7
110,266	-		HP15_p187g113	0.57	-0.9
110,271	-		HP15_p187g113	0.58	+0.1
110,305	-		HP15_p187g113	0.59	+2.1
110,305	-		HP15_p187g113	0.59	-1.2
110,321	+		HP15_p187g113	0.60	-0.2
110,321	+		HP15_p187g113	0.60	-0.7
110,321	+		HP15_p187g113	0.60	-1.0
110,321	+		HP15_p187g113	0.60	-0.1
110,321	+		HP15_p187g113	0.60	+2.8
110,324	-		HP15_p187g113	0.60	+0.7
110,326	+		HP15_p187g113	0.60	-0.2
110,329	-		HP15_p187g113	0.60	+0.5
110,379	-		HP15_p187g113	0.63	+1.7
110,384	-		HP15_p187g113	0.63	-1.1
110,384	-		HP15_p187g113	0.63	-1.1
110,386	+		HP15_p187g113	0.63	+1.2
110,395	+		HP15_p187g113	0.64	+1.0
110,396	+		HP15_p187g113	0.64	-1.1
110,396	+		HP15_p187g113	0.64	+0.7
110,396	+		HP15_p187g113	0.64	-0.9
110,396	+		HP15_p187g113	0.64	-0.3
110,403	-		HP15_p187g113	0.64	-0.3
110,403	-		HP15_p187g113	0.64	+4.6
110,429	-		HP15_p187g113	0.65	-0.9
110,437	+		HP15_p187g113	0.66	+2.1
110,440	-		HP15_p187g113	0.66	+1.2
110,458	+		HP15_p187g113	0.67	-1.0
110,458	+		HP15_p187g113	0.67	+0.6
110,458	+		HP15_p187g113	0.67	-0.1
110,466	-		HP15_p187g113	0.67	-0.8
110,466	-		HP15_p187g113	0.67	+0.0
110,534	+		HP15_p187g113	0.70	+2.3
110,542	-		HP15_p187g113	0.71	+1.5
110,562	-		HP15_p187g113	0.72	+0.7
110,562	-		HP15_p187g113	0.72	-2.7
110,567	-		HP15_p187g113	0.72	-1.3
110,623	+		HP15_p187g113	0.75	+0.2
110,653	+		HP15_p187g113	0.76	+1.7
110,653	+		HP15_p187g113	0.76	-1.2
110,658	+		HP15_p187g113	0.76	-0.4
110,661	-		HP15_p187g113	0.76	-0.7
110,808	+		HP15_p187g113	0.83	-1.0
110,890	-		HP15_p187g113	0.87	-0.9
110,942	+		HP15_p187g113	0.90	-0.8
110,952	+				+0.3
110,960	-				-0.7
110,998	+				-2.6
111,010	+				-0.6
111,027	+				+1.2
111,028	+				+0.7
111,037	-				-0.6
111,051	-				-1.3
111,068	-				+2.0
111,105	-				+2.5
111,163	+				+1.5
111,168	+				-0.5
111,168	+				-0.4
111,191	+				+1.8
111,204	-				+1.3
111,211	-				+1.2
111,211	-				-0.2
111,288	-				-0.4
111,327	+				-0.7
111,345	+		HP15_p187g114	0.11	+0.6
111,347	-		HP15_p187g114	0.11	+0.2
111,352	-		HP15_p187g114	0.11	-0.2
111,353	-		HP15_p187g114	0.11	+2.0
111,361	+		HP15_p187g114	0.12	+0.5
111,421	-		HP15_p187g114	0.15	+1.5
111,482	+		HP15_p187g114	0.18	-0.2
111,525	+		HP15_p187g114	0.21	-0.7
111,525	+		HP15_p187g114	0.21	+0.6
111,535	+		HP15_p187g114	0.21	+1.6
111,538	-		HP15_p187g114	0.22	-0.2
111,540	+		HP15_p187g114	0.22	+0.6
111,543	-		HP15_p187g114	0.22	-0.5
111,543	-		HP15_p187g114	0.22	-0.2
111,593	-		HP15_p187g114	0.25	+1.2
111,593	-		HP15_p187g114	0.25	+0.0
111,633	-		HP15_p187g114	0.27	+1.0
111,633	-		HP15_p187g114	0.27	-1.1
111,633	-		HP15_p187g114	0.27	-0.2
111,641	-		HP15_p187g114	0.27	+1.6
111,679	+		HP15_p187g114	0.29	-0.5
111,687	-		HP15_p187g114	0.30	-1.3
111,687	-		HP15_p187g114	0.30	-0.3
111,725	-		HP15_p187g114	0.32	+0.3
111,733	-		HP15_p187g114	0.32	+1.7
111,741	+		HP15_p187g114	0.33	-0.9
111,796	-		HP15_p187g114	0.36	-0.5
111,807	+		HP15_p187g114	0.36	-2.0
111,829	+		HP15_p187g114	0.38	+1.6
111,853	+		HP15_p187g114	0.39	+1.3
111,863	-		HP15_p187g114	0.39	-0.5
111,879	-		HP15_p187g114	0.40	-0.8
111,927	-		HP15_p187g114	0.43	-0.5
111,936	+		HP15_p187g114	0.44	-1.0
111,939	-		HP15_p187g114	0.44	-0.7
111,939	-		HP15_p187g114	0.44	+0.3
111,944	-		HP15_p187g114	0.44	-0.8
111,952	-		HP15_p187g114	0.44	+0.2
112,024	+		HP15_p187g114	0.48	-1.7
112,034	-		HP15_p187g114	0.49	+3.4