Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g75

Experiment: D-Alanine as (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine as (N)
67,511	+		HP15_p187g73	0.73	+0.1
67,523	+		HP15_p187g73	0.75	-0.7
67,577	-		HP15_p187g73	0.81	+1.7
67,587	+		HP15_p187g73	0.82	+1.0
67,599	+		HP15_p187g73	0.84	+1.7
67,600	-		HP15_p187g73	0.84	-0.1
67,618	-		HP15_p187g73	0.86	-1.5
67,618	-		HP15_p187g73	0.86	-0.2
67,627	+		HP15_p187g73	0.87	+1.8
67,627	+		HP15_p187g73	0.87	+0.9
67,635	-		HP15_p187g73	0.88	+0.0
67,650	+				+2.1
67,650	-				-0.1
67,652	+				-1.3
67,658	-				-0.5
67,658	-				-1.0
67,665	-				+0.0
67,680	+				-0.1
67,688	-				-0.8
67,693	-				+2.4
67,706	+				+1.3
67,714	-				+1.8
67,730	+				-0.9
67,772	+				+2.8
67,818	+				-0.8
67,826	+				-0.7
67,828	+				-0.2
67,828	+				-0.8
67,834	-				+0.6
67,836	-				+0.4
67,846	-				+0.7
67,998	+		HP15_p187g74	0.28	+1.6
67,998	+		HP15_p187g74	0.28	+0.2
67,998	+		HP15_p187g74	0.28	-0.5
67,998	+		HP15_p187g74	0.28	-0.2
68,006	-		HP15_p187g74	0.30	-0.3
68,006	-		HP15_p187g74	0.30	-1.5
68,035	+		HP15_p187g74	0.39	-0.9
68,043	-		HP15_p187g74	0.41	+1.1
68,043	-		HP15_p187g74	0.41	+0.3
68,045	-		HP15_p187g74	0.42	-0.5
68,046	+		HP15_p187g74	0.42	+0.1
68,083	+		HP15_p187g74	0.53	-1.1
68,088	-		HP15_p187g74	0.55	-0.3
68,088	-		HP15_p187g74	0.55	+0.7
68,128	-		HP15_p187g74	0.67	-1.1
68,138	+		HP15_p187g74	0.70	-0.2
68,141	-		HP15_p187g74	0.71	+1.9
68,153	+		HP15_p187g74	0.74	+1.6
68,161	-		HP15_p187g74	0.77	+0.7
68,174	+		HP15_p187g74	0.80	+0.8
68,221	+				+1.2
68,221	+				+0.3
68,227	-				+1.8
68,247	-				+0.8
68,312	+				-0.2
68,374	+				-0.5
68,382	-				-0.8
68,390	-				+1.2
68,404	+				+0.6
68,412	-				+1.7
68,412	-				+1.7
68,416	+				+0.3
68,427	-				+1.4
68,427	-				-0.3
68,456	-				+1.6
68,461	-				-2.3
68,529	-				-0.6
68,537	+				-0.6
68,539	-				-0.8
68,550	-				-0.3
68,600	+				+0.1
68,632	+		HP15_p187g75	0.11	+1.9
68,653	+		HP15_p187g75	0.12	+1.5
68,653	+		HP15_p187g75	0.12	+2.1
68,653	+		HP15_p187g75	0.12	+0.2
68,653	+		HP15_p187g75	0.12	-1.1
68,653	+		HP15_p187g75	0.12	+0.1
68,653	+		HP15_p187g75	0.12	+1.5
68,661	-		HP15_p187g75	0.13	+1.4
68,661	-		HP15_p187g75	0.13	-0.3
68,661	-		HP15_p187g75	0.13	-0.6
68,661	-		HP15_p187g75	0.13	+1.2
68,661	-		HP15_p187g75	0.13	-0.5
68,661	-		HP15_p187g75	0.13	+1.6
68,661	-		HP15_p187g75	0.13	-0.6
68,667	+		HP15_p187g75	0.13	+0.3
68,681	-		HP15_p187g75	0.14	-0.1
68,690	+		HP15_p187g75	0.15	+1.6
68,717	-		HP15_p187g75	0.17	+1.6
68,719	-		HP15_p187g75	0.17	+0.4
68,720	+		HP15_p187g75	0.17	+1.5
68,720	+		HP15_p187g75	0.17	-1.3
68,728	-		HP15_p187g75	0.18	+2.3
68,728	-		HP15_p187g75	0.18	-0.8
68,730	+		HP15_p187g75	0.18	+0.5
68,731	+		HP15_p187g75	0.18	+0.1
68,737	-		HP15_p187g75	0.18	+1.8
68,790	-		HP15_p187g75	0.22	+1.2
68,806	-		HP15_p187g75	0.24	-0.2
68,808	-		HP15_p187g75	0.24	-0.7
68,835	+		HP15_p187g75	0.26	-0.8
68,856	-		HP15_p187g75	0.27	+0.5
68,882	-		HP15_p187g75	0.29	-0.4
68,910	+		HP15_p187g75	0.31	-0.5
68,934	+		HP15_p187g75	0.33	-1.1
68,942	-		HP15_p187g75	0.34	+0.3
68,944	+		HP15_p187g75	0.34	+1.8
68,947	-		HP15_p187g75	0.34	-0.8
68,947	-		HP15_p187g75	0.34	+1.7
68,959	+		HP15_p187g75	0.35	-0.4
69,024	-		HP15_p187g75	0.40	+1.8
69,024	-		HP15_p187g75	0.40	-0.9
69,024	-		HP15_p187g75	0.40	+0.6
69,024	-		HP15_p187g75	0.40	-0.6
69,043	+		HP15_p187g75	0.41	+1.4
69,049	+		HP15_p187g75	0.42	+1.6
69,093	-		HP15_p187g75	0.45	+1.5
69,196	+		HP15_p187g75	0.53	-0.1
69,196	+		HP15_p187g75	0.53	+1.3
69,204	-		HP15_p187g75	0.53	-0.4
69,219	-		HP15_p187g75	0.54	-1.7
69,226	-		HP15_p187g75	0.55	+1.8
69,279	-		HP15_p187g75	0.59	+1.5
69,280	+		HP15_p187g75	0.59	+1.7
69,282	+		HP15_p187g75	0.59	-2.4
69,288	-		HP15_p187g75	0.59	-1.0
69,290	-		HP15_p187g75	0.60	+1.7
69,295	-		HP15_p187g75	0.60	-0.0
69,295	-		HP15_p187g75	0.60	+1.9
69,295	-		HP15_p187g75	0.60	-0.0
69,295	-		HP15_p187g75	0.60	+0.6
69,303	+		HP15_p187g75	0.61	+1.6
69,407	+		HP15_p187g75	0.68	+3.1
69,412	+		HP15_p187g75	0.69	+1.2
69,412	+		HP15_p187g75	0.69	+1.7
69,415	-		HP15_p187g75	0.69	+1.3
69,415	-		HP15_p187g75	0.69	+1.2
69,415	-		HP15_p187g75	0.69	+1.4
69,420	-		HP15_p187g75	0.69	-0.2
69,445	+		HP15_p187g75	0.71	+1.8
69,466	+		HP15_p187g75	0.73	+0.8
69,487	+		HP15_p187g75	0.74	+2.4
69,515	-		HP15_p187g75	0.76	+0.3
69,539	+		HP15_p187g75	0.78	+0.9
69,628	-		HP15_p187g75	0.85	-0.7
69,709	-				-0.7
69,709	-				-0.9
69,709	-				+1.4
69,711	+				+0.6
69,737	-				-1.3
69,763	+				+1.6
69,763	+				+0.2
69,763	+				+1.7
69,764	-				-0.3
69,768	+				-0.2
69,768	+				+0.3
69,768	+				-2.2
69,771	-				-1.1
69,771	-				-0.2
69,771	-				+1.5
69,771	-				-0.3
69,776	-				-1.0
69,776	-				-0.4
69,776	-				+1.9
69,795	-				+0.7
69,824	-				+1.8
69,830	-				-0.7
69,849	-				-0.2
69,867	-				-0.5
69,919	-				+0.0
69,931	-				+1.8
69,931	-				-0.1
69,955	+				+0.2
70,013	+				-0.7
70,064	-		HP15_p187g76	0.16	+1.8
70,093	+		HP15_p187g76	0.21	+1.6
70,093	+		HP15_p187g76	0.21	-0.5
70,093	+		HP15_p187g76	0.21	+1.8
70,093	+		HP15_p187g76	0.21	-0.5
70,093	+		HP15_p187g76	0.21	-0.1
70,093	+		HP15_p187g76	0.21	-0.7
70,093	+		HP15_p187g76	0.21	-0.1
70,101	-		HP15_p187g76	0.23	-0.5
70,101	-		HP15_p187g76	0.23	-1.0
70,101	-		HP15_p187g76	0.23	-0.4
70,119	+		HP15_p187g76	0.26	+0.6
70,121	+		HP15_p187g76	0.27	-1.8
70,162	+		HP15_p187g76	0.34	+1.8
70,184	-		HP15_p187g76	0.38	+1.7
70,236	-		HP15_p187g76	0.48	+1.6
70,237	+		HP15_p187g76	0.48	-0.6
70,245	-		HP15_p187g76	0.50	+0.1
70,277	-		HP15_p187g76	0.56	-0.0
70,296	+		HP15_p187g76	0.59	+1.7
70,309	-		HP15_p187g76	0.61	-0.9
70,323	+		HP15_p187g76	0.64	+2.1
70,352	+		HP15_p187g76	0.69	+1.9
70,417	+		HP15_p187g76	0.81	+0.5
70,417	+		HP15_p187g76	0.81	-0.3
70,425	-		HP15_p187g76	0.83	-0.5
70,425	-		HP15_p187g76	0.83	-1.1
70,425	-		HP15_p187g76	0.83	-0.1
70,425	-		HP15_p187g76	0.83	-0.5
70,566	+				+0.1
70,577	-				+2.0
70,577	-				-1.5
70,584	-				-0.7
70,594	-				+2.4
70,602	+				+1.0
70,602	+				+0.3
70,610	-				-0.3
70,610	-				+1.9
70,610	-				-0.7
70,626	+				+0.8
70,679	+				-1.3
70,769	-				-0.5
70,795	-				-1.0
70,796	+				+1.8
70,823	-				+3.2
70,825	+				-0.1
70,825	+				+0.9
70,832	+				-0.3