Strain Fitness in Marinobacter adhaerens HP15 around HP15_2765

Experiment: D-Alanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2763 and HP15_2764 are separated by 112 nucleotidesHP15_2764 and HP15_2765 are separated by 13 nucleotidesHP15_2765 and HP15_2766 are separated by 16 nucleotides HP15_2763: HP15_2763 - methyltransferase, UbiE/COQ5 family protein, at 2,917,115 to 2,917,747 _2763 HP15_2764: HP15_2764 - membrane protein, at 2,917,860 to 2,918,063 _2764 HP15_2765: HP15_2765 - conserved hypothetical protein, membrane, at 2,918,077 to 2,918,469 _2765 HP15_2766: HP15_2766 - sensory box/GGDEF family protein, at 2,918,486 to 2,919,520 _2766 Position (kb) 2918 2919Strain fitness (log2 ratio) -1 0 1 2at 2917.186 kb on - strand, within HP15_2763at 2917.408 kb on - strand, within HP15_2763at 2917.455 kb on + strand, within HP15_2763at 2917.574 kb on - strand, within HP15_2763at 2917.596 kb on - strand, within HP15_2763at 2917.657 kb on - strand, within HP15_2763at 2917.657 kb on - strand, within HP15_2763at 2917.751 kb on + strandat 2917.803 kb on - strandat 2917.837 kb on + strandat 2917.867 kb on + strandat 2917.875 kb on - strandat 2917.875 kb on - strandat 2917.913 kb on + strand, within HP15_2764at 2917.986 kb on + strand, within HP15_2764at 2917.986 kb on + strand, within HP15_2764at 2917.986 kb on + strand, within HP15_2764at 2918.066 kb on - strandat 2918.095 kb on - strandat 2918.102 kb on - strandat 2918.155 kb on + strand, within HP15_2765at 2918.163 kb on - strand, within HP15_2765at 2918.165 kb on + strand, within HP15_2765at 2918.165 kb on + strand, within HP15_2765at 2918.173 kb on - strand, within HP15_2765at 2918.196 kb on + strand, within HP15_2765at 2918.199 kb on - strand, within HP15_2765at 2918.209 kb on - strand, within HP15_2765at 2918.295 kb on + strand, within HP15_2765at 2918.427 kb on - strand, within HP15_2765at 2918.482 kb on - strandat 2918.536 kb on - strandat 2918.631 kb on + strand, within HP15_2766at 2918.727 kb on + strand, within HP15_2766at 2918.896 kb on + strand, within HP15_2766at 2919.042 kb on - strand, within HP15_2766at 2919.101 kb on + strand, within HP15_2766at 2919.146 kb on + strand, within HP15_2766at 2919.153 kb on + strand, within HP15_2766at 2919.417 kb on + strandat 2919.436 kb on - strandat 2919.436 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Alanine as (N)
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2,917,186 - HP15_2763 0.11 +1.9
2,917,408 - HP15_2763 0.46 -0.1
2,917,455 + HP15_2763 0.54 -0.0
2,917,574 - HP15_2763 0.73 +0.4
2,917,596 - HP15_2763 0.76 +1.7
2,917,657 - HP15_2763 0.86 +0.1
2,917,657 - HP15_2763 0.86 -0.1
2,917,751 + -0.6
2,917,803 - -0.7
2,917,837 + +0.1
2,917,867 + -0.5
2,917,875 - -0.8
2,917,875 - -0.3
2,917,913 + HP15_2764 0.26 -0.3
2,917,986 + HP15_2764 0.62 +2.1
2,917,986 + HP15_2764 0.62 -0.1
2,917,986 + HP15_2764 0.62 -0.3
2,918,066 - -0.0
2,918,095 - -0.1
2,918,102 - +0.1
2,918,155 + HP15_2765 0.20 -0.4
2,918,163 - HP15_2765 0.22 +1.2
2,918,165 + HP15_2765 0.22 -0.1
2,918,165 + HP15_2765 0.22 -1.3
2,918,173 - HP15_2765 0.24 -0.7
2,918,196 + HP15_2765 0.30 -0.6
2,918,199 - HP15_2765 0.31 -1.0
2,918,209 - HP15_2765 0.34 +0.0
2,918,295 + HP15_2765 0.55 +2.1
2,918,427 - HP15_2765 0.89 -0.4
2,918,482 - +0.1
2,918,536 - +1.7
2,918,631 + HP15_2766 0.14 +0.3
2,918,727 + HP15_2766 0.23 -0.8
2,918,896 + HP15_2766 0.40 +2.1
2,919,042 - HP15_2766 0.54 +0.1
2,919,101 + HP15_2766 0.59 -0.7
2,919,146 + HP15_2766 0.64 +2.0
2,919,153 + HP15_2766 0.64 -0.3
2,919,417 + +0.1
2,919,436 - +0.2
2,919,436 - +2.1

Or see this region's nucleotide sequence