Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2872
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
3,624,749 | + | -0.4 | |||
3,624,749 | + | -0.1 | |||
3,624,803 | + | -0.9 | |||
3,625,200 | - | -0.4 | |||
3,625,307 | - | -4.2 | |||
3,625,372 | - | argJ | DvMF_2872 | 0.11 | -4.6 |
3,625,372 | - | argJ | DvMF_2872 | 0.11 | -6.2 |
3,625,372 | - | argJ | DvMF_2872 | 0.11 | -4.3 |
3,625,406 | + | argJ | DvMF_2872 | 0.13 | -5.9 |
3,625,414 | - | argJ | DvMF_2872 | 0.14 | -5.1 |
3,625,907 | + | argJ | DvMF_2872 | 0.54 | -3.8 |
3,626,116 | - | argJ | DvMF_2872 | 0.71 | -5.6 |
3,626,241 | - | argJ | DvMF_2872 | 0.81 | -3.4 |
3,626,808 | - | -0.6 |
Or see this region's nucleotide sequence