Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2813

Experiment: methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methionine 1 mM
3,555,995	-		DvMF_2812	0.63	-0.3
3,556,106	-		DvMF_2812	0.75	-0.8
3,556,194	+		DvMF_2812	0.84	-0.1
3,556,204	-		DvMF_2812	0.85	-0.8
3,556,440	-				-0.2
3,556,643	+				-0.6
3,556,643	+				-0.3
3,556,651	-				-0.1
3,556,803	-				-0.4
3,557,293	+		DvMF_2813	0.48	-1.1
3,557,306	-		DvMF_2813	0.49	-0.2
3,557,361	-		DvMF_2813	0.54	-0.3
3,557,371	-		DvMF_2813	0.55	-0.4
3,557,454	+		DvMF_2813	0.63	-0.5
3,557,487	+		DvMF_2813	0.66	-0.1
3,557,504	-		DvMF_2813	0.67	-0.6
3,557,576	-				-1.0
3,557,605	+		DvMF_2813	0.77	-0.6
3,557,613	-		DvMF_2813	0.78	-0.6
3,557,750	-				+0.1
3,558,145	-				-0.1
3,558,169	+				-1.9
3,558,257	+				-5.4
3,558,330	+				-3.4
3,558,798	+	hisD	DvMF_2814	0.43	-3.9
3,558,803	+	hisD	DvMF_2814	0.43	-5.4
3,558,822	+	hisD	DvMF_2814	0.44	-5.6