Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2490 and DvMF_2491 are separated by 130 nucleotides DvMF_2491 and DvMF_2492 are separated by 95 nucleotides DvMF_2492 and DvMF_2493 are separated by 36 nucleotides DvMF_2493 and DvMF_2494 are separated by 37 nucleotides
DvMF_2490: DvMF_2490 - Polyprenyl synthetase (RefSeq), at 3,144,234 to 3,145,229
_2490
DvMF_2491: DvMF_2491 - purine or other phosphorylase family 1 (RefSeq), at 3,145,360 to 3,146,079
_2491
DvMF_2492: DvMF_2492 - hypothetical protein (RefSeq), at 3,146,175 to 3,146,324
_2492
DvMF_2493: DvMF_2493 - hypothetical protein (RefSeq), at 3,146,361 to 3,146,591
_2493
DvMF_2494: DvMF_2494 - nucleotide sugar dehydrogenase (RefSeq), at 3,146,629 to 3,147,945
_2494
Position (kb)
3146
3147 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3145.261 kb on + strand at 3145.293 kb on - strand at 3145.305 kb on + strand at 3145.384 kb on - strand at 3146.172 kb on - strand at 3146.223 kb on + strand, within DvMF_2492 at 3146.626 kb on + strand at 3146.941 kb on - strand, within DvMF_2494 at 3146.985 kb on + strand, within DvMF_2494
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 3,145,261 + -0.3 3,145,293 - -0.4 3,145,305 + -0.2 3,145,384 - -1.2 3,146,172 - -0.2 3,146,223 + DvMF_2492 0.32 -0.4 3,146,626 + -0.2 3,146,941 - DvMF_2494 0.24 -2.1 3,146,985 + DvMF_2494 0.27 -4.7
Or see this region's nucleotide sequence