Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2077 and DvMF_2078 are separated by 301 nucleotides
DvMF_2077: DvMF_2077 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 2,580,554 to 2,582,362
_2077
DvMF_2078: DvMF_2078 - peptidyl-prolyl cis-trans isomerase cyclophilin type (RefSeq), at 2,582,664 to 2,583,170
_2078
Position (kb)
2580
2581
2582
2583 Strain fitness (log2 ratio)
-1
0
1 at 2579.652 kb on + strand at 2579.975 kb on + strand at 2580.016 kb on - strand at 2580.061 kb on - strand at 2580.066 kb on - strand at 2580.351 kb on + strand at 2580.485 kb on + strand at 2580.505 kb on - strand at 2580.654 kb on - strand at 2580.830 kb on + strand, within DvMF_2077 at 2580.831 kb on + strand, within DvMF_2077 at 2581.069 kb on - strand, within DvMF_2077 at 2581.113 kb on - strand, within DvMF_2077 at 2581.148 kb on + strand, within DvMF_2077 at 2581.257 kb on + strand, within DvMF_2077 at 2581.427 kb on - strand, within DvMF_2077 at 2581.466 kb on + strand, within DvMF_2077 at 2581.479 kb on + strand, within DvMF_2077 at 2581.581 kb on - strand, within DvMF_2077 at 2581.607 kb on + strand, within DvMF_2077 at 2581.615 kb on + strand, within DvMF_2077 at 2581.615 kb on - strand, within DvMF_2077 at 2581.716 kb on + strand, within DvMF_2077 at 2581.777 kb on + strand, within DvMF_2077 at 2581.809 kb on + strand, within DvMF_2077 at 2581.861 kb on + strand, within DvMF_2077 at 2581.905 kb on - strand, within DvMF_2077 at 2582.033 kb on - strand, within DvMF_2077 at 2582.383 kb on + strand at 2582.457 kb on - strand at 2582.669 kb on - strand at 2582.741 kb on - strand, within DvMF_2078 at 2583.033 kb on - strand, within DvMF_2078 at 2583.068 kb on - strand, within DvMF_2078 at 2583.134 kb on - strand at 2583.136 kb on + strand at 2583.326 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,579,652 + -0.4 2,579,975 + -0.5 2,580,016 - -0.4 2,580,061 - -0.1 2,580,066 - -0.1 2,580,351 + -0.6 2,580,485 + -0.4 2,580,505 - +0.1 2,580,654 - -0.4 2,580,830 + DvMF_2077 0.15 -0.4 2,580,831 + DvMF_2077 0.15 +0.2 2,581,069 - DvMF_2077 0.28 -0.4 2,581,113 - DvMF_2077 0.31 +0.4 2,581,148 + DvMF_2077 0.33 -0.1 2,581,257 + DvMF_2077 0.39 -0.5 2,581,427 - DvMF_2077 0.48 -0.6 2,581,466 + DvMF_2077 0.50 -0.7 2,581,479 + DvMF_2077 0.51 +0.1 2,581,581 - DvMF_2077 0.57 -0.4 2,581,607 + DvMF_2077 0.58 -0.2 2,581,615 + DvMF_2077 0.59 -0.1 2,581,615 - DvMF_2077 0.59 -0.5 2,581,716 + DvMF_2077 0.64 -0.0 2,581,777 + DvMF_2077 0.68 -0.0 2,581,809 + DvMF_2077 0.69 -0.3 2,581,861 + DvMF_2077 0.72 -0.3 2,581,905 - DvMF_2077 0.75 -0.5 2,582,033 - DvMF_2077 0.82 -0.4 2,582,383 + +0.0 2,582,457 - -0.5 2,582,669 - +0.9 2,582,741 - DvMF_2078 0.15 -0.0 2,583,033 - DvMF_2078 0.73 -0.4 2,583,068 - DvMF_2078 0.80 +0.1 2,583,134 - -0.9 2,583,136 + -0.3 2,583,326 + -0.6
Or see this region's nucleotide sequence