Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1998
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,476,621 | - | DvMF_1997 | 0.44 | -0.3 | |
2,476,683 | + | DvMF_1997 | 0.49 | -0.6 | |
2,476,691 | - | DvMF_1997 | 0.49 | -0.5 | |
2,476,849 | - | DvMF_1997 | 0.62 | -0.7 | |
2,476,881 | - | DvMF_1997 | 0.65 | -0.8 | |
2,477,276 | - | +0.0 | |||
2,477,295 | - | -0.5 | |||
2,477,420 | + | -0.1 | |||
2,477,579 | - | DvMF_1998 | 0.30 | +0.2 | |
2,477,603 | + | DvMF_1998 | 0.35 | -0.2 | |
2,477,682 | + | DvMF_1998 | 0.52 | -0.2 | |
2,477,749 | - | DvMF_1998 | 0.66 | -0.4 | |
2,477,749 | - | DvMF_1998 | 0.66 | -0.3 | |
2,477,764 | - | DvMF_1998 | 0.70 | +1.5 | |
2,477,815 | - | DvMF_1998 | 0.81 | -0.3 | |
2,477,923 | - | -0.9 | |||
2,478,274 | + | DvMF_1999 | 0.24 | -0.1 | |
2,478,363 | + | DvMF_1999 | 0.30 | -0.4 | |
2,478,833 | + | DvMF_1999 | 0.61 | -0.8 | |
2,478,871 | + | DvMF_1999 | 0.63 | +1.1 |
Or see this region's nucleotide sequence