Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1819 and DvMF_1820 are separated by 482 nucleotides DvMF_1820 and DvMF_1821 are separated by 87 nucleotides DvMF_1821 and DvMF_1822 are separated by 199 nucleotides
DvMF_1819: DvMF_1819 - anaerobic ribonucleoside triphosphate reductase (RefSeq), at 2,219,503 to 2,221,413
_1819
DvMF_1820: DvMF_1820 - hypothetical protein (RefSeq), at 2,221,896 to 2,223,434
_1820
DvMF_1821: DvMF_1821 - Tir chaperone family protein (RefSeq), at 2,223,522 to 2,224,004
_1821
DvMF_1822: DvMF_1822 - aminotransferase class I and II (RefSeq), at 2,224,204 to 2,225,421
_1822
Position (kb)
2221
2222
2223
2224 Strain fitness (log2 ratio)
-1
0
1 at 2220.931 kb on + strand, within DvMF_1819 at 2220.939 kb on - strand, within DvMF_1819 at 2220.969 kb on + strand, within DvMF_1819 at 2220.977 kb on - strand, within DvMF_1819 at 2221.034 kb on - strand, within DvMF_1819 at 2221.263 kb on - strand at 2221.635 kb on + strand at 2222.010 kb on - strand at 2222.208 kb on - strand, within DvMF_1820 at 2222.441 kb on + strand, within DvMF_1820 at 2222.518 kb on + strand, within DvMF_1820 at 2222.553 kb on + strand, within DvMF_1820 at 2222.602 kb on + strand, within DvMF_1820 at 2222.718 kb on + strand, within DvMF_1820 at 2222.795 kb on + strand, within DvMF_1820 at 2222.808 kb on - strand, within DvMF_1820 at 2222.914 kb on + strand, within DvMF_1820 at 2222.921 kb on + strand, within DvMF_1820 at 2222.949 kb on - strand, within DvMF_1820 at 2223.220 kb on + strand, within DvMF_1820 at 2223.277 kb on + strand, within DvMF_1820 at 2223.472 kb on + strand at 2223.480 kb on - strand at 2223.480 kb on - strand at 2223.655 kb on + strand, within DvMF_1821 at 2223.900 kb on + strand, within DvMF_1821 at 2224.072 kb on + strand at 2224.415 kb on - strand, within DvMF_1822
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,220,931 + DvMF_1819 0.75 -0.7 2,220,939 - DvMF_1819 0.75 -0.5 2,220,969 + DvMF_1819 0.77 -0.4 2,220,977 - DvMF_1819 0.77 -0.4 2,221,034 - DvMF_1819 0.80 -0.2 2,221,263 - -0.5 2,221,635 + -0.9 2,222,010 - -0.4 2,222,208 - DvMF_1820 0.20 -0.3 2,222,441 + DvMF_1820 0.35 -0.4 2,222,518 + DvMF_1820 0.40 -0.5 2,222,553 + DvMF_1820 0.43 +0.1 2,222,602 + DvMF_1820 0.46 -0.5 2,222,718 + DvMF_1820 0.53 -0.1 2,222,795 + DvMF_1820 0.58 -1.1 2,222,808 - DvMF_1820 0.59 -0.4 2,222,914 + DvMF_1820 0.66 -0.2 2,222,921 + DvMF_1820 0.67 -0.3 2,222,949 - DvMF_1820 0.68 -0.4 2,223,220 + DvMF_1820 0.86 -0.4 2,223,277 + DvMF_1820 0.90 -0.8 2,223,472 + -0.3 2,223,480 - -0.1 2,223,480 - -0.1 2,223,655 + DvMF_1821 0.28 -0.8 2,223,900 + DvMF_1821 0.78 -0.3 2,224,072 + -0.3 2,224,415 - DvMF_1822 0.17 +0.0
Or see this region's nucleotide sequence