Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1794 and DvMF_1795 are separated by 51 nucleotides DvMF_1795 and DvMF_1796 are separated by 69 nucleotides DvMF_1796 and DvMF_1797 are separated by 123 nucleotides
DvMF_1794: DvMF_1794 - 3-isopropylmalate dehydrogenase (RefSeq), at 2,194,483 to 2,195,559
_1794
DvMF_1795: DvMF_1795 - hypothetical protein (RefSeq), at 2,195,611 to 2,195,760
_1795
DvMF_1796: DvMF_1796 - hypothetical protein (RefSeq), at 2,195,830 to 2,196,576
_1796
DvMF_1797: DvMF_1797 - molybdenum cofactor synthesis domain protein (RefSeq), at 2,196,700 to 2,198,667
_1797
Position (kb) 2195
2196 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 2194.616 kb on - strand, within DvMF_1794 at 2195.112 kb on + strand, within DvMF_1794 at 2195.823 kb on + strand at 2195.898 kb on - strand at 2195.960 kb on - strand, within DvMF_1796 at 2195.998 kb on + strand, within DvMF_1796 at 2196.007 kb on + strand, within DvMF_1796 at 2196.267 kb on + strand, within DvMF_1796 at 2196.427 kb on + strand, within DvMF_1796 at 2196.427 kb on - strand, within DvMF_1796
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,194,616 - DvMF_1794 0.12 -3.6 2,195,112 + DvMF_1794 0.58 -6.9 2,195,823 + -0.9 2,195,898 - -0.4 2,195,960 - DvMF_1796 0.17 -0.3 2,195,998 + DvMF_1796 0.22 +0.0 2,196,007 + DvMF_1796 0.24 -0.4 2,196,267 + DvMF_1796 0.59 -0.9 2,196,427 + DvMF_1796 0.80 -0.0 2,196,427 - DvMF_1796 0.80 -0.8
Or see this region's nucleotide sequence