Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1791 and DvMF_1792 are separated by 0 nucleotides DvMF_1792 and DvMF_1793 are separated by 53 nucleotides DvMF_1793 and DvMF_1794 are separated by 254 nucleotides
DvMF_1791: DvMF_1791 - 2-isopropylmalate synthase (RefSeq), at 2,190,882 to 2,192,426
_1791
DvMF_1792: DvMF_1792 - 3-isopropylmalate dehydratase large subunit (RefSeq), at 2,192,427 to 2,193,683
_1792
DvMF_1793: DvMF_1793 - 3-isopropylmalate dehydratase, small subunit (RefSeq), at 2,193,737 to 2,194,228
_1793
DvMF_1794: DvMF_1794 - 3-isopropylmalate dehydrogenase (RefSeq), at 2,194,483 to 2,195,559
_1794
Position (kb)
2192
2193
2194 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2191.664 kb on - strand, within DvMF_1791 at 2191.861 kb on - strand, within DvMF_1791 at 2192.047 kb on + strand, within DvMF_1791 at 2192.079 kb on + strand, within DvMF_1791 at 2192.184 kb on + strand, within DvMF_1791 at 2192.194 kb on - strand, within DvMF_1791 at 2192.629 kb on - strand, within DvMF_1792 at 2192.659 kb on + strand, within DvMF_1792 at 2192.752 kb on + strand, within DvMF_1792 at 2192.770 kb on - strand, within DvMF_1792 at 2192.931 kb on + strand, within DvMF_1792 at 2192.941 kb on - strand, within DvMF_1792 at 2192.947 kb on + strand, within DvMF_1792 at 2193.206 kb on + strand, within DvMF_1792 at 2193.383 kb on + strand, within DvMF_1792 at 2193.431 kb on + strand, within DvMF_1792 at 2193.536 kb on + strand, within DvMF_1792 at 2193.833 kb on - strand, within DvMF_1793 at 2193.855 kb on + strand, within DvMF_1793 at 2194.210 kb on - strand at 2194.247 kb on - strand at 2194.247 kb on - strand at 2194.399 kb on + strand at 2194.616 kb on - strand, within DvMF_1794
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,191,664 - DvMF_1791 0.51 -2.3 2,191,861 - DvMF_1791 0.63 -4.9 2,192,047 + DvMF_1791 0.75 -3.6 2,192,079 + DvMF_1791 0.77 -3.3 2,192,184 + DvMF_1791 0.84 -3.4 2,192,194 - DvMF_1791 0.85 -3.3 2,192,629 - DvMF_1792 0.16 -4.7 2,192,659 + DvMF_1792 0.18 -3.9 2,192,752 + DvMF_1792 0.26 -4.7 2,192,770 - DvMF_1792 0.27 -4.9 2,192,931 + DvMF_1792 0.40 -4.3 2,192,941 - DvMF_1792 0.41 -3.9 2,192,947 + DvMF_1792 0.41 -3.2 2,193,206 + DvMF_1792 0.62 -4.2 2,193,383 + DvMF_1792 0.76 -5.5 2,193,431 + DvMF_1792 0.80 -4.9 2,193,536 + DvMF_1792 0.88 -3.6 2,193,833 - DvMF_1793 0.20 -3.9 2,193,855 + DvMF_1793 0.24 -5.0 2,194,210 - -2.8 2,194,247 - -1.4 2,194,247 - -1.0 2,194,399 + -0.5 2,194,616 - DvMF_1794 0.12 -3.6
Or see this region's nucleotide sequence