Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1791
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,190,647 | + | +1.0 | |||
2,190,713 | + | +0.2 | |||
2,190,860 | - | -0.2 | |||
2,191,060 | - | DvMF_1791 | 0.12 | -5.5 | |
2,191,090 | + | DvMF_1791 | 0.13 | -3.2 | |
2,191,098 | - | DvMF_1791 | 0.14 | -4.0 | |
2,191,238 | - | DvMF_1791 | 0.23 | -3.7 | |
2,191,420 | - | DvMF_1791 | 0.35 | -5.5 | |
2,191,664 | - | DvMF_1791 | 0.51 | -2.3 | |
2,191,861 | - | DvMF_1791 | 0.63 | -4.9 | |
2,192,047 | + | DvMF_1791 | 0.75 | -3.6 | |
2,192,079 | + | DvMF_1791 | 0.77 | -3.3 | |
2,192,184 | + | DvMF_1791 | 0.84 | -3.4 | |
2,192,194 | - | DvMF_1791 | 0.85 | -3.3 | |
2,192,629 | - | DvMF_1792 | 0.16 | -4.7 | |
2,192,659 | + | DvMF_1792 | 0.18 | -3.9 | |
2,192,752 | + | DvMF_1792 | 0.26 | -4.7 | |
2,192,770 | - | DvMF_1792 | 0.27 | -4.9 | |
2,192,931 | + | DvMF_1792 | 0.40 | -4.3 | |
2,192,941 | - | DvMF_1792 | 0.41 | -3.9 | |
2,192,947 | + | DvMF_1792 | 0.41 | -3.2 | |
2,193,206 | + | DvMF_1792 | 0.62 | -4.2 | |
2,193,383 | + | DvMF_1792 | 0.76 | -5.5 |
Or see this region's nucleotide sequence