Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1720
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,102,204 | - | DvMF_1719 | 0.60 | -0.0 | |
2,102,283 | + | DvMF_1719 | 0.67 | +0.0 | |
2,102,333 | + | DvMF_1719 | 0.71 | +0.6 | |
2,102,341 | - | DvMF_1719 | 0.71 | -0.4 | |
2,102,490 | - | DvMF_1719 | 0.84 | -0.3 | |
2,102,603 | - | -0.3 | |||
2,103,178 | - | -0.0 | |||
2,103,271 | - | -1.1 | |||
2,103,271 | - | -0.6 | |||
2,103,457 | + | DvMF_1720 | 0.24 | -0.3 | |
2,103,465 | - | DvMF_1720 | 0.25 | -0.5 | |
2,103,467 | + | DvMF_1720 | 0.25 | -0.4 | |
2,103,586 | - | DvMF_1720 | 0.35 | -0.3 | |
2,103,845 | - | DvMF_1720 | 0.56 | -0.5 | |
2,103,918 | - | DvMF_1720 | 0.61 | -0.6 | |
2,103,940 | + | DvMF_1720 | 0.63 | -0.2 | |
2,104,260 | + | DvMF_1720 | 0.89 | -0.8 | |
2,104,339 | + | -0.3 | |||
2,104,417 | + | -0.4 | |||
2,104,996 | - | DvMF_1721 | 0.22 | -0.9 | |
2,105,206 | - | DvMF_1721 | 0.38 | -0.4 | |
2,105,236 | + | DvMF_1721 | 0.40 | -0.3 | |
2,105,241 | + | DvMF_1721 | 0.41 | +0.2 | |
2,105,244 | - | DvMF_1721 | 0.41 | -0.5 |
Or see this region's nucleotide sequence