Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_R0048
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,054,534 | - | -0.1 | |||
2,054,537 | - | -0.6 | |||
2,054,591 | - | DvMF_1687 | 0.14 | -0.3 | |
2,054,714 | + | DvMF_1687 | 0.25 | -0.7 | |
2,054,767 | + | DvMF_1687 | 0.30 | -0.8 | |
2,054,790 | + | DvMF_1687 | 0.32 | -0.4 | |
2,054,888 | + | DvMF_1687 | 0.42 | -0.4 | |
2,054,961 | - | DvMF_1687 | 0.49 | -0.6 | |
2,055,001 | + | DvMF_1687 | 0.52 | -0.5 | |
2,055,006 | + | DvMF_1687 | 0.53 | +0.2 | |
2,055,128 | - | DvMF_1687 | 0.64 | -0.6 | |
2,055,137 | + | DvMF_1687 | 0.65 | -0.6 | |
2,055,272 | - | DvMF_1687 | 0.78 | -0.6 | |
2,055,376 | + | DvMF_1687 | 0.87 | -0.6 | |
2,055,376 | + | DvMF_1687 | 0.87 | -0.4 | |
2,055,413 | + | -0.2 | |||
2,055,523 | - | -0.3 | |||
2,055,706 | + | -0.3 | |||
2,055,714 | - | -0.2 | |||
2,055,773 | + | -0.4 | |||
2,055,906 | - | -0.1 | |||
2,056,477 | - | DvMF_1688 | 0.48 | +0.7 | |
2,056,500 | - | DvMF_1688 | 0.50 | -0.6 |
Or see this region's nucleotide sequence