Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1685 and DvMF_1686 are separated by 157 nucleotides DvMF_1686 and DvMF_1687 are separated by 341 nucleotides DvMF_1687 and DvMF_R0048 are separated by 10 nucleotides DvMF_R0048 and DvMF_1688 are separated by 328 nucleotides
DvMF_1685: DvMF_1685 - hypothetical protein (RefSeq), at 2,053,441 to 2,053,764
_1685
DvMF_1686: DvMF_1686 - hypothetical protein (RefSeq), at 2,053,922 to 2,054,101
_1686
DvMF_1687: DvMF_1687 - integrase family protein (RefSeq), at 2,054,443 to 2,055,510
_1687
DvMF_R0048: DvMF_R0048 - tRNA-Val (RefSeq), at 2,055,521 to 2,055,596
_R0048
DvMF_1688: DvMF_1688 - hypothetical protein (RefSeq), at 2,055,925 to 2,057,079
_1688
Position (kb)
2054
2055
2056 Strain fitness (log2 ratio)
-1
0
1 at 2053.578 kb on + strand, within DvMF_1685 at 2053.719 kb on + strand, within DvMF_1685 at 2053.727 kb on - strand, within DvMF_1685 at 2053.737 kb on - strand at 2053.918 kb on - strand at 2053.957 kb on + strand, within DvMF_1686 at 2053.975 kb on - strand, within DvMF_1686 at 2054.261 kb on - strand at 2054.264 kb on + strand at 2054.375 kb on + strand at 2054.425 kb on + strand at 2054.427 kb on + strand at 2054.534 kb on - strand at 2054.537 kb on - strand at 2054.591 kb on - strand, within DvMF_1687 at 2054.714 kb on + strand, within DvMF_1687 at 2054.767 kb on + strand, within DvMF_1687 at 2054.790 kb on + strand, within DvMF_1687 at 2054.888 kb on + strand, within DvMF_1687 at 2054.961 kb on - strand, within DvMF_1687 at 2055.001 kb on + strand, within DvMF_1687 at 2055.006 kb on + strand, within DvMF_1687 at 2055.128 kb on - strand, within DvMF_1687 at 2055.137 kb on + strand, within DvMF_1687 at 2055.272 kb on - strand, within DvMF_1687 at 2055.376 kb on + strand, within DvMF_1687 at 2055.376 kb on + strand, within DvMF_1687 at 2055.413 kb on + strand at 2055.523 kb on - strand at 2055.706 kb on + strand at 2055.714 kb on - strand at 2055.773 kb on + strand at 2055.906 kb on - strand at 2056.477 kb on - strand, within DvMF_1688 at 2056.500 kb on - strand, within DvMF_1688
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,053,578 + DvMF_1685 0.42 -0.8 2,053,719 + DvMF_1685 0.86 -0.4 2,053,727 - DvMF_1685 0.88 -0.6 2,053,737 - +0.1 2,053,918 - -0.4 2,053,957 + DvMF_1686 0.19 -0.6 2,053,975 - DvMF_1686 0.29 -0.5 2,054,261 - -0.3 2,054,264 + -0.3 2,054,375 + -0.1 2,054,425 + -0.2 2,054,427 + -0.6 2,054,534 - -0.1 2,054,537 - -0.6 2,054,591 - DvMF_1687 0.14 -0.3 2,054,714 + DvMF_1687 0.25 -0.7 2,054,767 + DvMF_1687 0.30 -0.8 2,054,790 + DvMF_1687 0.32 -0.4 2,054,888 + DvMF_1687 0.42 -0.4 2,054,961 - DvMF_1687 0.49 -0.6 2,055,001 + DvMF_1687 0.52 -0.5 2,055,006 + DvMF_1687 0.53 +0.2 2,055,128 - DvMF_1687 0.64 -0.6 2,055,137 + DvMF_1687 0.65 -0.6 2,055,272 - DvMF_1687 0.78 -0.6 2,055,376 + DvMF_1687 0.87 -0.6 2,055,376 + DvMF_1687 0.87 -0.4 2,055,413 + -0.2 2,055,523 - -0.3 2,055,706 + -0.3 2,055,714 - -0.2 2,055,773 + -0.4 2,055,906 - -0.1 2,056,477 - DvMF_1688 0.48 +0.7 2,056,500 - DvMF_1688 0.50 -0.6
Or see this region's nucleotide sequence