Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1683 and DvMF_1684 are separated by 16 nucleotides DvMF_1684 and DvMF_1685 are separated by 29 nucleotides DvMF_1685 and DvMF_1686 are separated by 157 nucleotides DvMF_1686 and DvMF_1687 are separated by 341 nucleotides
DvMF_1683: DvMF_1683 - protein of unknown function DUF1351 (RefSeq), at 2,051,587 to 2,052,486
_1683
DvMF_1684: DvMF_1684 - hypothetical protein (RefSeq), at 2,052,503 to 2,053,411
_1684
DvMF_1685: DvMF_1685 - hypothetical protein (RefSeq), at 2,053,441 to 2,053,764
_1685
DvMF_1686: DvMF_1686 - hypothetical protein (RefSeq), at 2,053,922 to 2,054,101
_1686
DvMF_1687: DvMF_1687 - integrase family protein (RefSeq), at 2,054,443 to 2,055,510
_1687
Position (kb)
2053
2054 Strain fitness (log2 ratio)
-1
0
1 at 2052.728 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.038 kb on - strand, within DvMF_1684 at 2053.038 kb on - strand, within DvMF_1684 at 2053.419 kb on + strand at 2053.419 kb on + strand at 2053.427 kb on - strand at 2053.427 kb on - strand at 2053.578 kb on + strand, within DvMF_1685 at 2053.719 kb on + strand, within DvMF_1685 at 2053.727 kb on - strand, within DvMF_1685 at 2053.737 kb on - strand at 2053.918 kb on - strand at 2053.957 kb on + strand, within DvMF_1686 at 2053.975 kb on - strand, within DvMF_1686 at 2054.261 kb on - strand at 2054.264 kb on + strand at 2054.375 kb on + strand at 2054.425 kb on + strand at 2054.427 kb on + strand at 2054.534 kb on - strand at 2054.537 kb on - strand at 2054.591 kb on - strand, within DvMF_1687 at 2054.714 kb on + strand, within DvMF_1687
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,052,728 + DvMF_1684 0.25 -0.2 2,053,030 + DvMF_1684 0.58 -0.1 2,053,030 + DvMF_1684 0.58 -0.4 2,053,030 + DvMF_1684 0.58 -0.3 2,053,030 + DvMF_1684 0.58 +0.0 2,053,030 + DvMF_1684 0.58 -0.6 2,053,038 - DvMF_1684 0.59 -0.3 2,053,038 - DvMF_1684 0.59 -0.1 2,053,419 + -0.3 2,053,419 + -0.0 2,053,427 - +0.3 2,053,427 - -0.1 2,053,578 + DvMF_1685 0.42 -0.8 2,053,719 + DvMF_1685 0.86 -0.4 2,053,727 - DvMF_1685 0.88 -0.6 2,053,737 - +0.1 2,053,918 - -0.4 2,053,957 + DvMF_1686 0.19 -0.6 2,053,975 - DvMF_1686 0.29 -0.5 2,054,261 - -0.3 2,054,264 + -0.3 2,054,375 + -0.1 2,054,425 + -0.2 2,054,427 + -0.6 2,054,534 - -0.1 2,054,537 - -0.6 2,054,591 - DvMF_1687 0.14 -0.3 2,054,714 + DvMF_1687 0.25 -0.7
Or see this region's nucleotide sequence