Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1547
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
1,908,588 | + | +0.0 | |||
1,909,282 | - | +0.2 | |||
1,909,430 | - | +0.0 | |||
1,909,610 | + | DvMF_1547 | 0.17 | -0.2 | |
1,909,610 | + | DvMF_1547 | 0.17 | -0.3 | |
1,909,610 | + | DvMF_1547 | 0.17 | -0.2 | |
1,909,959 | - | DvMF_1547 | 0.37 | -0.2 | |
1,910,033 | + | DvMF_1547 | 0.41 | -0.1 | |
1,910,092 | + | DvMF_1547 | 0.44 | -0.2 | |
1,910,131 | + | DvMF_1547 | 0.47 | -0.1 | |
1,910,261 | + | DvMF_1547 | 0.54 | -0.1 | |
1,910,574 | - | DvMF_1547 | 0.72 | -0.3 | |
1,910,803 | + | DvMF_1547 | 0.85 | -0.1 | |
1,910,842 | - | DvMF_1547 | 0.87 | +0.0 | |
1,910,927 | + | -0.5 | |||
1,910,927 | + | -0.2 | |||
1,911,047 | + | +0.0 | |||
1,911,064 | + | -0.1 | |||
1,911,076 | + | -0.2 | |||
1,911,230 | - | -0.2 | |||
1,911,267 | - | -0.5 | |||
1,911,297 | + | -0.7 | |||
1,911,406 | + | DvMF_1548 | 0.13 | -0.4 | |
1,911,691 | - | DvMF_1548 | 0.50 | -0.7 | |
1,911,691 | - | DvMF_1548 | 0.50 | +0.3 | |
1,911,890 | + | DvMF_1548 | 0.75 | -0.5 | |
1,912,055 | - | -0.6 |
Or see this region's nucleotide sequence